KEGG   Escherichia coli K-12 W3110: JW2726
Entry
JW2726            CDS       T00068                                 
Symbol
ygcH
Name
(GenBank) hypothetical protein
  KO
K19126  CRISPR system Cascade subunit CasE
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecj02048]
    JW2726 (ygcH)
Prokaryotic defense system [BR:ecj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    JW2726 (ygcH)
SSDB
Motif
Pfam: CRISPR_assoc Cas6
Other DBs
NCBI-ProteinID: BAE76833
UniProt: Q46897
Structure
Position
complement(2878444..2879043)
AA seq 199 aa
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMP
VSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEA
EQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQ
QGIGPAKSMGCGLLSLAPL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtatctcagtaaagtcatcattgccagggcctggagcagggatctttaccaacttcac
cagggattatggcatttatttccaaacagaccggatgctgctcgtgattttctttttcat
gttgagaagcgaaacacaccagaaggctgtcatgttttattgcagtcagcgcaaatgcct
gtttcaactgccgttgcgacagtcattaaaactaaacaggttgaatttcaacttcaggtt
ggtgttccactctattttcggcttcgggcaaatccgatcaaaactattctcgacaatcaa
aagcgcctggacagtaaagggaatattaaacgctgtcgggttccgttaataaaagaagca
gaacaaatcgcgtggttgcaacgtaaattgggcaatgcggcgcgcgttgaagatgtgcat
cccatatcggaacggccacagtatttttctggtgatggtaaaagtggaaagatccaaacg
gtttgctttgaaggtgtgctcaccatcaacgacgcgccagcgttaatagatcttgtacag
caaggtattgggccagctaaatcgatgggatgtggcttgctatctttggctccactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (7)   
   PDB (7)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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