KEGG   Escherichia coli K-12 W3110: JW5547
Entry
JW5547            CDS       T00068                                 
Symbol
nfi
Name
(GenBank) endonuclease V
  KO
K05982  deoxyribonuclease V [EC:3.1.21.7]
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecj03400]
    JW5547 (nfi)
Enzymes [BR:ecj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.7  deoxyribonuclease V
     JW5547 (nfi)
DNA repair and recombination proteins [BR:ecj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     JW5547 (nfi)
SSDB
Motif
Pfam: Endonuclease_5 UvrC_RNaseH_dom DUF1580
Other DBs
NCBI-ProteinID: BAE77321
UniProt: P68739
Structure
Position
complement(3437220..3437891)
AA seq 223 aa
MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELV
EYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFG
LLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRV
SVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP
NT seq 672 nt   +upstreamnt  +downstreamnt
atggatctcgcgtcattacgcgctcaacaaatcgaactggcttcttctgtgatccgcgag
gatcgactcgataaagatccaccggatctgatcgccggagccgatgtcgggtttgagcag
ggcggagaagtgacgcgagcggcgatggtgctgctgaaatatccctcgcttgagctggtc
gagtataaagttgcccgcatcgccaccaccatgccttacattccaggttttctttccttc
cgcgaatatcctgcgctgctggcagcgtgggagatgctgtcgcaaaagccggatttagtg
tttgtcgatggtcatgggatctcgcatcctcgccgtcttggcgtcgccagccattttggc
ttattggtggatgtgccgaccattggcgtggcgaaaaaacggctctgcggtaaattcgaa
ccgctctccagcgaaccgggcgcgctggccccactgatggataaaggcgagcagctggcc
tgggtctggcgcagcaaagcgcgctgtaacccgttgtttatcgctaccggccatcgggtc
agcgtggacagcgcgctggcgtgggtacaacgctgcatgaaaggctatcgtctgccggag
ccaacgcgctgggcggacgcggtggcctcggaacgtccggcgttcgtgcgctatacagca
aatcagccctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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