KEGG T03708: LI62

Enterobacter hormaechei subsp. steigerwaltii: LI62_04015

Entry

LI62_04015        CDS       T03708

Name

(GenBank) 23S rRNA pseudouridylate synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

ecly Enterobacter hormaechei subsp. steigerwaltii

Brite

KEGG Orthology (KO) [BR:ecly00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecly03009]
    LI62_04015
   03016 Transfer RNA biogenesis [BR:ecly03016]
    LI62_04015
Enzymes [BR:ecly01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     LI62_04015
    5.4.99.29  23S rRNA pseudouridine746 synthase
     LI62_04015
Ribosome biogenesis [BR:ecly03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LI62_04015
Transfer RNA biogenesis [BR:ecly03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    LI62_04015

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AJB61260

Position

complement(775141..775800)

AA seq 219 aa
MVMEPYNPPMDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV
HRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPAQAEGLVDLPLICDWP
NRPKQKVCYETGKAAQTEYEVLEYAPDNTARVLLKPITGRSHQLRVHMLAMGHPILGDRF
YAPPEALALAPRLQLHAQTLTITHPAFGNAMTFKAPVDF

NT seq 660 nt +upstreamnt +downstreamnt
atggtaatggagccctacaatcccccgatggatccgtggctggtcattctgtatcaggac
gagcacattatggtggttaacaagccgagcggcttgttatccgtgccggggcgtctggaa
gagcataaagacagcgtgatgacgcgtatccagcgtgattatccccaggccgagtctgtc
catcgtctggatatggcgaccagcggcgtgattgtggtggctctgaataaagcggcagaa
cgcgagctgaagcgtcagttccgcgagcgcgagccgaagaaacagtatgtcgcgcgcgtc
tggggccatccggcgcaggcggaagggctggtggatttaccgctgatttgcgactggccg
aaccggccaaagcagaaggtgtgttacgaaaccggcaaggccgcgcaaaccgagtatgaa
gtgctggagtacgcgccggataacaccgcgcgcgtcctgctgaagccgattaccgggcgc
tcccaccagctgcgtgtgcatatgcttgcgatgggtcaccccattctgggggacagattc
tatgcgccgccggaagcgctggcgttagcgccgcgcctgcaactgcatgcgcagacgctc
actatcacccaccctgctttcggcaacgccatgacgttcaaagccccggtggacttctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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