KEGG T00672: EcSMS35

Escherichia coli SMS-3-5 (environmental): EcSMS35_0375

Entry

EcSMS35_0375 CDS T00672

Gene name

lacZ

Definition

beta-D-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

ecm Escherichia coli SMS-3-5 (environmental)

Pathway

ecm00052	Galactose metabolism
ecm00511	Other glycan degradation
ecm00600	Sphingolipid metabolism
ecm01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:ecm00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:ecm00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:ecm00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

170681400

NCBI-GeneID:

6144942

UniProt:

B1LIM9

Position

complement(387449..390523)

AA seq 1024 aa
MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPHFASWRNSEEARTDRPSQQLRSLNGEWR
FAWFPAPEAVPESWLDCDLPDADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPAENP
TGCYSLTFNIDECWLQKGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRA
GKNRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAV
LEAEVQMCGELRDELRVTVSLWQGETQVASGTTPFGGEIIDERGGYADRVTLRLNVENPA
LWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPVLIRGVNRHEH
HPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG
MVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD
PSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGELRPLILCEYA
HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR
QFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGRTIEVTSEYLFRHSDNELLHWSVALD
GKPLASGEMPLDVAPQDKQLIELPELPQPESTGQLWLTVHVVQPNATAWSEAGHISAWQQ
WRLAENLSVALPSAPHAIPQLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDEKQLLTP
LRDQFIRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEVALLQCTADILADAVLITTA
HAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLTCQLAQVAERVNWLG
LGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNI
SRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLV
WCQK

NT seq 3075 nt +upstreamnt +downstreamnt
atgactatgattacggattcactggccgtcgtattacaacgtcgtgactgggaaaaccct
ggcgttacccaacttaatcgccttgcggcacatccccatttcgccagctggcgaaatagc
gaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgc
tttgcctggtttccggcaccagaagcggtgccggaaagctggctggattgcgatcttcct
gacgccgatactgtcgtcgtcccctcaaactggcagatgcacggttacgatgcgcccatc
tacaccaacgtgacctatcccattacggtcaatccgccttttgttcccgcggagaatccg
acgggttgttactcgctcacatttaatattgatgaatgctggctacagaaaggccagacg
cgaattatttttgatggtgttaactcggcgtttcatctgtggtgcaacgggcgctgggtc
ggttacggccaggacagccgtttgccgtctgaatttgacctgagcgcatttttacgcgcc
ggaaaaaaccgcctcgcggtgatggtgctgcgctggagtgacggcagttatctggaagat
caggatatgtggcggatgagcggcattttccgtgacgtctcgttgctgcacaaaccgacc
acacaaatcagcgatttccatgttgccactcgctttaatgatgatttcagccgcgcggta
ctggaggcagaagttcagatgtgcggcgaactgcgcgatgagctgcgggtgacggtttct
ttgtggcagggtgaaacgcaggtcgccagcggcaccacgcctttcggcggtgaaattatc
gatgagcgtggtggttatgccgatcgcgtcacgctacgtctgaacgtcgaaaacccggcg
ctgtggagcgccgaaatcccgaatctctatcgtgcggtggttgaactgcacaccgccgac
ggcacgctgattgaagcagaagcctgcgatgtcggtttccgcgaagtgcggattgaaaat
ggtctcctgctgctgaacggcaagccggtgctgattcgcggcgttaaccgtcacgagcat
catcctctgcatggtcaggtcatggatgagcagacgatggtgcaggatatcctgctgatg
aagcagaacaactttaacgccgtgcgctgttcgcattatccgaatcatccgctgtggtac
acgttgtgcgaccgctacggcctgtatgtggtggatgaagccaatattgaaacccacggc
atggtgccaatgaatcgtctgaccgatgatccgcgctggctaccagcgatgagcgaacgc
gtaacgcgaatggtgcagcgcgatcgtaatcacccgagtgtgatcatctggtcgctgggg
aatgaatcaggccacggcgctaatcacgacgcgctgtatcgctggatcaaatctgtcgat
ccttcccgcccggtgcagtatgaaggcggcggagccgacaccacggccaccgatattatt
tgcccgatgtacgcgcgcgtggatgaagaccagcccttcccggctgtgccgaaatggtcc
atcaaaaaatggctttcgctgcctggagaactgcgcccgctgatcctttgcgaatatgcc
cacgcgatgggtaacagtcttggcggcttcgctaaatactggcaggcatttcgtcagtac
ccccgtttacagggcggcttcgtctgggactgggtggatcagtcgctgattaaatatgat
gaaaacggcaacccgtggtcggcttacggcggtgattttggcgatacgccgaacgatcgc
cagttctgcatgaacggtctggtatttgccgaccgcacgccgcatccggcgctgacggaa
gcaaaacaccagcagcagtttttccagttccgtttatccgggcgaaccatcgaagtgacc
agcgaatacctgttccgtcatagcgataacgagctcctgcactggtcggtggcactggat
ggcaagccgctggcaagcggtgaaatgcctctggatgttgctccacaagataaacagttg
attgaactgcctgaactaccgcagccggaaagcaccggacaactctggcttacggtacac
gtagtgcaaccgaacgcgaccgcatggtcagaagccggacacattagcgcctggcagcag
tggcgtctggcggaaaacctcagtgtggcactcccctccgcgccccacgccatcccgcaa
ctgaccaccagcgaaatggatttttgcatcgagctgggtaataagcgttggcaatttaac
cgccagtcaggctttctttcacagatgtggattggcgatgaaaaacaactgctgacgccg
ctgcgcgatcagttcatccgcgcaccgctggataacgacattggcgtaagtgaagcgacc
cgcattgaccctaacgcctgggtcgaacgctggaaggcggcgggccattaccaggccgaa
gtggcgttgttgcagtgcacggcagatatacttgccgacgcggtgctgattacgaccgct
cacgcgtggcagcatcaggggaaaaccttatttatcagccggaaaacctaccggattgat
ggtagtggtcaaatggcgattaccgttgatgttgaagtggcgagcgatacaccgcatccg
gcgcggattggcctgacctgccagctggcgcaggtcgcagagcgggtaaactggctcgga
ttagggccgcaagaaaactatcccgaccgccttactgcggcctgttttgaccgctgggat
ctgccattgtcagacatgtataccccttacgtcttcccgagcgaaaacggtctgcgctgc
gggacgcgcgaattgaattatggcccacaccagtggcgcggcgacttccagttcaatatc
agtcgctacagccaacaacaactgatggaaaccagccatcgccatctgctgcacgcggaa
gaaggcacatggctgaatatcgacggtttccatatggggattggtggcgacgactcctgg
agcccgtcagtgtcggcggaattccagctgagcgccggtcgctaccattaccagttggtc
tggtgtcaaaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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