KEGG T00672: EcSMS35

Escherichia coli SMS-3-5 (environmental): EcSMS35_2748

Entry

EcSMS35_2748      CDS       T00672

Symbol

rluD

Name

(GenBank) ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

ecm Escherichia coli SMS-3-5 (environmental)

Brite

KEGG Orthology (KO) [BR:ecm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecm03009]
    EcSMS35_2748 (rluD)
Enzymes [BR:ecm01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     EcSMS35_2748 (rluD)
Ribosome biogenesis [BR:ecm03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EcSMS35_2748 (rluD)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2 TruB_N

Other DBs

NCBI-ProteinID:

ACB19607

UniProt:

B1LPA3

Position

complement(2830000..2830980)

AA seq 326 aa
MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL
GGEQVAINAEIEEEARFEPQDIPLDIVYEDDDIIVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT
AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP
IPQDMVELIEVMRADFEEHKDEVDWL

NT seq 981 nt +upstreamnt +downstreamnt
atggcacaacgagtacagctcactgcaacggtgtccgaaaaccaactcggtcaacgctta
gatcaggctttggccgaaatgttcccggattattcacgttcgcggataaaagaatggatc
ctcgaccagcgcgtgctggttaacggcaaagtttgtgataagccgaaagaaaaagtattg
ggtggcgagcaggttgccatcaacgctgagattgaagaagaagcgcgttttgaaccgcag
gatatcccgctggatatcgtctatgaagatgacgatatcatcgtcattaataaaccgcgc
gacctggtggtacatcctggcgcgggtaacccggatggcacggtactgaatgcattgctt
cattattatccgcccattgccgatgtaccgcgtgcaggcatcgtccatcgtctggataaa
gacaccactggcctgatggttgtggcaaaaaccgttccggctcagacgcgtttagtcgaa
tctttgcaaaggcgtgaaattactcgtgagtatgaagcggtggcaattggtcatatgacc
gctggcggtacagtagatgaaccaatcagccgccacccgaccaaacgtacccatatggcg
gtgcatccgatgggcaaaccagcggtgactcactatcgcatcatggaacacttccgtgtg
cacacgcgtctgcggttgcgtctggaaactggacgtacgcaccagatccgcgtgcatatg
gcccatatcactcatccgctggtgggcgatccggtttatggtggccgtccgcgtccgcca
aaaggtgcttcggaagcgtttatctccacgctgcgtaaatttgaccgccaggcgcttcat
gcaaccatgctgcgtctttatcacccgatctccggtatcgaaatggaatggcatgcgcct
attccacaagatatggtggagctgattgaggtgatgcgcgccgatttcgaagagcataaa
gatgaagtggactggttatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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