KEGG E.coli: b3623

Escherichia coli K-12 MG1655: b3623

Entry

b3623 CDS E.coli

Gene name waaU, ECK3613, JW3598, rfaK, waaK

Definition lipopolysaccharide core biosynthesis

Orthology K03277 heptosyltransferase IV [EC:2.4.-.-]

Pathway eco00540 Lipopolysaccharide biosynthesis
eco01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:eco00540]

SSDB

Motif Pfam: Glyco_transf_9

Other DBs NCBI-GI: 16131494
NCBI-GeneID: 948147
RegulonDB: B3623
EcoGene: EG11423
ECOCYC: EG11423
UniProt: P27242

Position complement(3796262..3797335)

AA seq 357 aa
MRLGTFHKKKRFYINKIKINFLSFLFRNKINNQITDPAQVKSCLIIHDNNKLGDLIVLSS
IYRELYSKGVKITLLTNRKGGEFLSNNKNIFEFCIKESTGFLEMLTLCKHLRDLQFDIVL
DPFETMPSFKHSLILSSLKDSYILGFDHWYKRYYSFYHPHDECLKEHMSTRAIEILKHIY
GEGKFSTNYDLHLPVDVEDKIKEFIGDTRIVIINPLGAKKICRLTFEQIKVIYQEVKTHF
ENYRIIFTGLPQDLLTIPILEIETLPFDEFIYTVALTKYSDFVISVDTALVHIAAAYHKP
TLAFYPNSRTPEYPSHLIWSPNHHKSIQIVSPTYTVKDIDTETLTNSVKRLSCIDKK

NT seq 1074 nt +upstreamnt +downstreamnt
atgcgcttaggaacttttcacaaaaagaaaagattttatataaacaaaatcaagattaat
ttcctttcttttttatttcgtaataaaataaataatcaaattacagatccagcacaagtt
aaatcatgccttattattcatgataataataaacttggtgatctaattgtattaagttcg
atttatcgtgaactttatagtaaaggggttaaaataactcttctcacaaatagaaagggt
ggggaatttctctctaataataaaaatatatttgagttctgtattaaagaatcaaccggt
tttcttgaaatgcttactctatgtaagcatctgcgggatttacagttcgatattgtatta
gacccctttgaaactatgccctcatttaagcatagcttaatattatcaagtttaaaagat
tcttacattctgggttttgatcattggtataagcgttactattcattttaccatccccac
gatgaatgtttaaaagaacatatgagtacacgagcaatagaaatactgaagcatatttat
ggtgagggtaaattttccaccaactacgacttgcatttaccagtagatgttgaagataaa
ataaaagaatttattggagatacaagaatagtcattattaatccattaggtgcaaaaaaa
atatgccgtcttacgtttgagcaaataaaagttatatatcaagaagtgaaaacacacttt
gaaaattatcggattatatttaccgggttaccgcaagatttattgacaataccaatactt
gaaatcgaaacactaccatttgatgagtttatttataccgttgcgttgaccaagtatagt
gattttgtcatttctgttgatacagctcttgttcatatcgctgcggcttatcataaacca
acgcttgcattttaccctaattcacgtactccggaatatccctcgcatttaatttggtcc
ccgaatcatcataaatctatacaaatagtatccccaacatatacggtaaaagatatcgat
actgaaactttaactaattcagtaaagagattaagttgtatagataagaagtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   ECOCYC (1)   
   ECOGENE (1)   
   REGULONDB-ECO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)

Escherichia coli K-12 W3110: JW3598

Entry

JW3598 CDS E.coli_J

Gene name rfaK

Definition lipopolysaccharide core biosynthesis

Orthology K03277 heptosyltransferase IV [EC:2.4.-.-]

Pathway ecj00540 Lipopolysaccharide biosynthesis
ecj01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:ecj00540]

SSDB

Motif Pfam: Glyco_transf_9

Other DBs NCBI-GI: 89110388
Nara: JW3598
Wisconsin: b3623
UniProt: P27242

Position 3841103..3842176

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-GI (1)   
   NARA-ECJ (1)   
   WISCONSIN (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)

DBGET integrated database retrieval system