KEGG E.coli: b0092

Escherichia coli K-12 MG1655: b0092

Entry

b0092 CDS E.coli

Gene name ddlB, ddl, ECK0093, JW0090

Definition D-alanine:D-alanine ligase (EC:6.3.2.4)

Orthology K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]

Pathway eco00473 D-Alanine metabolism
eco00550 Peptidoglycan biosynthesis

Class Metabolism; Metabolism of Other Amino Acids; D-Alanine metabolism
[PATH:eco00473]
Metabolism; Glycan Biosynthesis and Metabolism; Peptidoglycan
biosynthesis [PATH:eco00550]

SSDB

Motif Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 RimK TTL GARS_A
LigA
PROSITE: DALA_DALA_LIGASE_2 DALA_DALA_LIGASE_1 ATP_GRASP

Other DBs NCBI-GI: 16128085
NCBI-GeneID: 946324
RegulonDB: B0092
EcoGene: EG10214
ECOCYC: EG10214
UniProt: P07862

Structure

PDB: 1IOW 1IOV 2DLN

Position 102233..103153

AA seq 306 aa
MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI
ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA
EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE
KWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL
VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILELAD

NT seq 921 nt +upstreamnt +downstreamnt
atgactgataaaatcgcggtcctgttgggtgggacctccgctgagcgggaagtttctctg
aattctggcgcagcggtgttagccggactgcgtgaaggcggtattgacgcgtatcctgtc
gacccgaaagaagtcgacgtgacgcaactgaagtcgatgggctttcagaaagtgtttatc
gcgctacacggtcgcggcggtgaagatggtacgctgcaggggatgctcgagctgatgggc
ttgccttataccggaagcggagtgatggcatctgcgctttcaatggataaactacgcagc
aaacttctatggcaaggtgccggtttaccggtcgcgccgtgggtagcgttaacccgcgca
gagtttgaaaaaggcctgagcgataagcagttagcagaaatttctgctctgggtttgccg
gttatcgttaagccgagccgcgaaggttccagtgtgggaatgtcaaaagtagtagcagaa
aatgctctacaagatgcattaagattggcatttcagcacgatgaagaagtattgattgaa
aaatggctaagtgggccggagttcacggttgcgatactcggtgaagaaattttaccgtca
atacgtattcaaccgtccggaaccttctatgattatgaggcgaagtatctctctgatgag
acacagtatttctgccccgcaggtctggaagcgtcacaagaggccaatttgcaggcatta
gtgctgaaagcatggacgacgttaggttgcaaaggatggggacgtattgacgttatgctg
gacagcgatggacagttttatctgctggaagccaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcacgtcaggcaggtatgagcttctcgcagttggtagtacga
attctggaactggcggactaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   ECOCYC (1)   
   ECOGENE (1)   
   REGULONDB-ECO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (10)   
   Pfam (7)   
   PROSITE (3)   
All databases (28)

DBGET integrated database retrieval system