KEGG   Escherichia coli K-12 MG1655: b0107
Entry
b0107             CDS       T00007                                 
Symbol
hofB
Name
(RefSeq) T2SSE family protein
  KO
K02504  protein transport protein HofB
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eco02044]
    b0107 (hofB)
Secretion system [BR:eco02044]
 Type II secretion system
  Type IVa pilus homolog protein
   b0107 (hofB)
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_22 AAA_7 AAA_30 AAA_14 ResIII AAA_11 AAA_29 nSTAND3 DEAD AAA Sigma54_activ_2 AAA_19 AAA_23 PhoH SLFN-g3_helicase
Other DBs
NCBI-GeneID: 947481
NCBI-ProteinID: NP_414649
Pasteur: hofB
RegulonDB: ECK120002011
ECOCYC: EG12106
ASAP: ABE-0000370
UniProt: P36645
Position
complement(115714..117099)
AA seq 461 aa
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME
GHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH
PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKV
VLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLN
TADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE
IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRR
QQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES
LETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaatattccacagctcactgccctgtgtctgcgttatcatggagtcttgctggatgcc
agcgaagaggtggttcatgttgcggtagtcgatgcaccttcgcatgagctactggacgca
ttgcatttcgctaccaccaaacgtattgagatcacctgctggacgcgccaacaaatggaa
ggtcacgccagtcgcacacaacagacattgcccgtagctgttcaggagaagcatcagccc
aaagcagagttgctaactcgaacgttacaatctgcgctggaacaacgcgcgtctgatatt
catatcgaaccagcggacaatgcctaccgcatccgcttgcgtatcgacggcgtattgcat
cctttaccggatgtttcaccggatgccggagtcgcattaaccgccagattaaaagtgctg
ggaaacctggatattgcggaacatcgcctgccgcaggacgggcaattcactgtcgaactg
gcaggaaacgccgtctcatttcgtattgcgaccttaccatgtcggggtggtgaaaaggtg
gtattaaggttgttacagcaggtgggtcaggcactggatgtcaacacgcttggaatgcag
ccgttacaactggcggactttgctcatgccttgcaacaaccacagggactggtgctggta
actggccctaccggcagcggcaaaacggtcacgctttatagtgccctgcaaaagctgaat
accgctgacattaatatttgtagcgtcgaagatccagttgagatccccatagccggacta
aaccagacgcaaatccatccgcgtgccggactcacctttcagggcgttttgcgtgcgtta
ttgcgccaggatcctgacgtcatcatgatcggagagatccgcgatggcgaaacagcagag
atcgctattaaagcggcgcaaactggtcacctggtgttgtctaccctacacactaattcc
acctgcgaaacgctggtacgtttacagcaaatgggggtcgcccgctggatgctatcatcg
gcgcttacgctggtaatagcccagcgtctggtacgcaaactttgcccacattgtcgccgg
cagcaaggggagcccatccacattccagacaatgtatggccatcgccgctgccccactgg
caggcacccggttgtgtacattgctaccacggtttttatggtcgtacggccttatttgaa
gttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcg
ctggaaacgcacgcacgacaggcgggtatgcgtacgctttttgaaaacggctgcctggcc
gtagagcaaggcttaaccacctttgaagagttaatccgcgtactggggatgccgcatggc
gagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (48)   

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