KEGG   Escherichia coli K-12 MG1655: b2949
Entry
b2949             CDS       T00007                                 
Symbol
yqgF
Name
(RefSeq) ribonuclease H-like domain containing nuclease
  KO
K07447  putative pre-16S rRNA nuclease [EC:3.1.-.-]
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eco03009]
    b2949 (yqgF)
Ribosome biogenesis [BR:eco03009]
 Prokaryotic type
  rRNA processing factors
   b2949 (yqgF)
SSDB
Motif
Pfam: RuvX Glyoxalase_8
Other DBs
NCBI-GeneID: 947439
NCBI-ProteinID: NP_417424
Pasteur: yqgF
RegulonDB: ECK120004086
ECOCYC: G7525
ASAP: ABE-0009672
UniProt: P0A8I1
Structure
Position
3093500..3093916
AA seq 138 aa
MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG
LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK
VDSASAVIILESYFEQGY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgagtggaaccttactcgccttcgacttcggcaccaaaagcattggcgtagcggtcggc
caacgcattaccggcaccgctcgccctttgcctgcaattaaagcacaggacggtacgccg
gactggaacattatcgagcgtttactgaaagagtggcagccggacgaaatcatcgtcggt
ttgccgctgaatatggacggcaccgagcaaccattgactgccagagcgcgtaaatttgcc
aaccgtattcatggccgtttcggtgttgaagtaaagctccatgacgagcgtcttagcact
gtggaagcccgttccggtctgtttgaacagggcggctatcgggcgctcaacaaaggcaaa
gttgactctgcctctgcggttattattctcgaaagctatttcgagcagggatattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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