KEGG   Escherichia coli APEC O78 (APEC): APECO78_16560
Entry
APECO78_16560     CDS       T02445                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
ecoa  Escherichia coli APEC O78 (APEC)
Pathway
ecoa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APECO78_16560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecoa03400]
    APECO78_16560
DNA repair and recombination proteins [BR:ecoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     APECO78_16560
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      APECO78_16560
SSDB
Motif
Pfam: RecO_C RecO_N
Other DBs
NCBI-ProteinID: AGC88033
Position
complement(3446257..3446985)
AA seq 242 aa
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL
AGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN
KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaggctggcagcgcgcatttgtcctgcatagtcgcccgtggagcgaaaccagcctg
atgctggacgtcttcacggaggaatcggggcgcgtgcgtctggttgccaaaggcgcacgc
tctaaacgctctaccctgaaaggtgcattacagcctttcacccctctcttgctacgtttt
ggcgggcgtggcgaagtcaaaacgctgcgcagtgctgaagccgtctcgctggcgctgcca
ttaagcggtatcacgctttacagcggtctgtacatcaacgaacttctctcccgcgtactg
gaatacgagacgcgcttctctgaactttttttcgattacttgcactgcattcagtctctt
gcaggggtcactggtacgccagaacccgcgctgcgccgctttgaactggcactgctcggg
catctgggttatggcgtcaattttacccattgtgcgggtagcggcgagccggtagatgac
accatgacgtatcgttatcgcgaagaaaaagggtttatcgcaagcgtcgttatcgacaat
aaaacgttcaccggaaggcagttaaaagcgttaaacgcacgggaatttcctgacgcagac
acactgcgcgctgcgaaacgctttacccgcatggcgcttaagccgtatcttggcggtaaa
cctttaaagagcagggaactgttccggcaatttatgcctaagcgaacggtgaaaacacat
tatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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