KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0121
Entry
ECRM13516_0121    CDS       T03011                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex / Dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00010  Glycolysis / Gluconeogenesis
ecoh00020  Citrate cycle (TCA cycle)
ecoh00260  Glycine, serine and threonine metabolism
ecoh00280  Valine, leucine and isoleucine degradation
ecoh00310  Lysine degradation
ecoh00380  Tryptophan metabolism
ecoh00620  Pyruvate metabolism
ecoh00630  Glyoxylate and dicarboxylate metabolism
ecoh00640  Propanoate metabolism
ecoh00785  Lipoic acid metabolism
ecoh01100  Metabolic pathways
ecoh01110  Biosynthesis of secondary metabolites
ecoh01120  Microbial metabolism in diverse environments
ecoh01200  Carbon metabolism
ecoh01210  2-Oxocarboxylic acid metabolism
ecoh01240  Biosynthesis of cofactors
Module
ecoh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ecoh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ecoh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ecoh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ECRM13516_0121 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ECRM13516_0121 (lpdA)
   00620 Pyruvate metabolism
    ECRM13516_0121 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ECRM13516_0121 (lpdA)
   00640 Propanoate metabolism
    ECRM13516_0121 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ECRM13516_0121 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ECRM13516_0121 (lpdA)
   00310 Lysine degradation
    ECRM13516_0121 (lpdA)
   00380 Tryptophan metabolism
    ECRM13516_0121 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ECRM13516_0121 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecoh04147]
    ECRM13516_0121 (lpdA)
Enzymes [BR:ecoh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ECRM13516_0121 (lpdA)
Exosome [BR:ecoh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ECRM13516_0121 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 HI0933_like AlaDh_PNT_C Thi4 NAD_binding_8 FAD_binding_3 DAO Lycopene_cycl FMO-like
Other DBs
NCBI-ProteinID: AHG12817
Position
134957..136414
AA seq 485 aa
MTAGDKYIEVMMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVG
CIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRK
VKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDAL
ELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKK
FNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEV
DDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPS
IAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVI
GGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNP
KAKKK
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgaccgccggagataaatatatagaggtcatgatgagtactgaaatcaaaactcaggtc
gtggtacttggggcaggccccgcaggttactccgctgccttccgttgcgctgatttaggt
ctggaaaccgtaatcgtagaacgttacaacacccttggcggtgtttgcctgaacgtcggc
tgtatcccttctaaagcactgctgcacgtagcaaaagttatcgaagaagccaaagcgctg
gctgaacacggtatcgtcttcggcgaaccgaaaaccgatatcgacaagattcgtacctgg
aaagagaaagtgatcaatcagctgaccggtggtctggctggtatggcgaaaggccgcaaa
gtcaaagtggtcaacggtctgggtaaatttaccggggctaacaccctggaagttgaaggt
gagaacggtaaaaccgtgatcaacttcgacaacgcgatcattgcagcgggttctcgcccg
attcaactgccgtttattccgcatgaagatccgcgtatctgggactccactgacgcgctg
gaactgaaagaagtaccagaacgcctgctggtaatgggtggcggtatcatcggtctggaa
atgggcaccgtttaccacgcgctgggttcacagattgacgtggttgaaatgttcgaccag
gttatcccggcagctgacaaagacatcgttaaagtcttcaccaagcgtatcagcaagaaa
ttcaacctgatgctggaaaccaaagttaccgccgttgaagcgaaagaagacggtatttat
gtgacgatggaaggcaaaaaagcacccgctgaaccgcagcgttacgacgccgtgctggta
gcgattggtcgtgtgccgaacggtaaaaacctcgacgcaggcaaagctggcgtggaagtt
gacgaccgtggtttcatccgcgttgacaaacagctgcgtaccaacgtaccgcacatcttt
gctatcggcgatattgtcggtcagccgatgctggcacacaaaggtgttcacgaaggtcac
gtcgccgctgaagttatcgccggtaaaaaacattacttcgatccgaaagttatcccgtcc
atcgcctataccgaaccagaagttgcatgggtaggtctgactgagaaagaagcgaaagag
aaaggcatcagctatgaaaccgccaccttcccgtgggctgcttctggtcgtgctatcgct
tccgactgcgcagacggtatgaccaagctgattttcgacaaagaatctcaccgtgtgatc
ggtggtgcgattgtcggtactaacggcggcgagctgctgggtgaaatcggcctggcaatc
gaaatgggttgtgatgctgaagacatcgcactgaccatccacgcgcacccgactctgcac
gagtctgtgggcctggcggcagaagtgttcgaaggtagcattaccgacctgccgaacccg
aaagcgaagaagaagtaa

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