KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3397
Entry
ECRM13516_3397    CDS       T03011                                 
Symbol
luxS
Name
(GenBank) S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS
  KO
K07173  S-ribosylhomocysteine lyase [EC:4.4.1.21]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00270  Cysteine and methionine metabolism
ecoh01100  Metabolic pathways
ecoh01230  Biosynthesis of amino acids
ecoh02024  Quorum sensing
ecoh02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    ECRM13516_3397 (luxS)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECRM13516_3397 (luxS)
   02026 Biofilm formation - Escherichia coli
    ECRM13516_3397 (luxS)
Enzymes [BR:ecoh01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.21  S-ribosylhomocysteine lyase
     ECRM13516_3397 (luxS)
SSDB
Motif
Pfam: LuxS DUF749 AMG1_II
Other DBs
NCBI-ProteinID: AHG16037
Position
complement(3363625..3364140)
AA seq 171 aa
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF
AGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI
PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI
NT seq 516 nt   +upstreamnt  +downstreamnt
atgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgcagttcgg
gtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttc
tgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacctgttt
gctggttttatgcgtaaccatcttaacggtaatggtgtagagattatcgatatctcgcca
atgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgtt
gctgatgcctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatt
ccggagctgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcag
gatattgcgcgtagcattctggaacgtgacgtgcgcatcaacagcaacgaagaactggcg
ctgccgaaagagaagttgcaggaactgcacatttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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