KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_5623
Entry
ECRM13516_5623    CDS       T03011                                 
Symbol
virB5
Name
(GenBank) Minor pilin of type IV secretion complex (VirB5)
  KO
K03200  type IV secretion system protein VirB5
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ECRM13516_5623 (virB5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoh02044]
    ECRM13516_5623 (virB5)
Secretion system [BR:ecoh02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   ECRM13516_5623 (virB5)
SSDB
Motif
Pfam: T4SS Baculo_PEP_C Nuf2_DHR10-like WipA_N YlqD
Other DBs
NCBI-ProteinID: AHG18201
Position
pRM13516:complement(53607..54248)
AA seq 213 aa
MKDKVLSFLFAGIITITSPSIFASGIPVVDVTAIAKTVEEGLNRAAEAARQLEQLKQQYE
QTIRYAEEQKKRLEGFTDFSNGFDSASSYMKDSLSTITNSAKSDLSSLRSQYDLSSNVAE
TQQKYDAILAKIKFYENFNNEMHERAERLTTLQKEFASADTPQKKADLSNQLNTEKLTME
LQLKQYDIAERQLENERKAQYETYVRQKRRDLS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaaagataaagtattatcatttctctttgctggaataattaccataacatcaccatca
atctttgcgtctggtattccagtagtagacgttacggcgatagctaaaacagttgaagaa
gggctaaatcgtgccgctgaagcggcaagacagcttgagcaactcaagcaacaatatgaa
cagaccataagatacgctgaagaacagaagaaaagactcgaaggcttcactgatttcagc
aatggctttgatagcgcatccagctatatgaaggattctctatcaacaataacaaatagt
gcaaaatcagatcttagctctttgcgatcgcaatatgacttatcaagcaacgttgcagag
acgcaacaaaaatatgatgcaatcctggctaagatcaaattctatgaaaatttcaacaat
gaaatgcatgaaagggctgagagattaaccacgttacagaaggagttcgcgtcagcagat
actccgcaaaaaaaagctgacttatctaaccaattgaatacagaaaaattgacaatggag
ctacaattgaagcaatatgatattgctgaacggcaactagagaatgagcggaaagctcaa
tatgaaacatatgttcgccaaaagagaagagatttaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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