KEGG   Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_04727
Entry
ECOPMV1_04727     CDS       T02847                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
ecoi  Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi03030  DNA replication
ecoi03430  Mismatch repair
ecoi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECOPMV1_04727 (holC)
   03430 Mismatch repair
    ECOPMV1_04727 (holC)
   03440 Homologous recombination
    ECOPMV1_04727 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecoi03032]
    ECOPMV1_04727 (holC)
   03400 DNA repair and recombination proteins [BR:ecoi03400]
    ECOPMV1_04727 (holC)
Enzymes [BR:ecoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECOPMV1_04727 (holC)
DNA replication proteins [BR:ecoi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECOPMV1_04727 (holC)
DNA repair and recombination proteins [BR:ecoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECOPMV1_04727 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: CDH68011
Position
complement(4837573..4838016)
AA seq 147 aa
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq 444 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcagttggtgtgtgaaattgccgcagaacgttggcgcagtggtaagcgcgtactc
atcgcctgtgaagatgaaaagcaggcttaccgactggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaagcgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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