KEGG   Escherichia coli LY180: LY180_10350
Entry
LY180_10350       CDS       T02846                                 
Symbol
sbcB
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
ecol  Escherichia coli LY180
Pathway
ecol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LY180_10350 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecol03400]
    LY180_10350 (sbcB)
Enzymes [BR:ecol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     LY180_10350 (sbcB)
DNA repair and recombination proteins [BR:ecol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     LY180_10350 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LY180_10350 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LY180_10350 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-GeneID: 16979741
NCBI-ProteinID: AGW09232
Position
2161083..2162510
AA seq 475 aa
MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ
PGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF
YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA
HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR
GNTSWVAPLAWHPENRNAVIMVDLAGDISLLLELDSDTLRERLYTAKTDLGDNAAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS
DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD
YAEQQRWLEHRRQVFTPEFLQGYADELQMLAQQYADDKEKVALLKALWQYAEEIV
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgatgaatgacggtaagcaacaatctacctttttgtttcacgattacgaaacctttggc
acgcaccccgcgttagatcgccctgcacagttcgcagccattcgcaccgatagcgaattc
aatgtcatcggcgaacccgaagtcttttactgcaagcccgcggatgactatttaccccag
cctggagcagtattaattaccggtattaccccgcaggaagcacgggcgaaaggagaaaac
gaagccgcgtttgccgcccgtattcactcgctttttaccgtaccgaagacctgtattctg
ggctacaacaatgtgcgtttcgacgacgaagtcacacgcaacgttttttatcgtaatttc
tacgatccttacgcctggagctggcagcatgataactcgcgctgggatttgttggatgtt
atgcgtgcctgttatgccctgcgcccggaaggaataaactggcctgaaaatgatgacggt
ctaccgagctttcgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcc
cacgatgcgatggctgatgtgtacgccactattgcgatggcaaagctggtaaaaacgcgt
cagccacgcctgtttgattatctctttacccatcgtaataaacacaaactgatggcgttg
attgatgttccgcagatgaaacccctggtgcacgtttccggaatgtttggagcatggcgc
ggcaataccagctgggtggcaccgctggcgtggcatcctgaaaatcgcaatgccgtaatt
atggtggatttggcaggagacatttcgctattactggaactggatagcgacacattgcgc
gagcgtttatataccgcaaaaaccgatcttggcgataacgccgccgttccggttaagctg
gtgcatatcaataaatgtccggtgctggcccaggcgaatacgctacgcccggaagatgcc
gaccgactgggaattaatcgtcagcattgcctcgataacctgaaaattctgcgtgaaaat
ccgcaagtgcgcgaaaaagtggtggcgatattcgcggaagccgaaccgtttacgccttca
gataacgtggatgcacagctttataacggctttttcagtgacgccgatcgtgcagcaatg
aaaattgtgctggaaaccgagccgcgtaatttaccggcactggatatcacttttgtcgat
aaacggattgaaaagctgttgttcaattatcgggcgcgcaacttcccggggacgctggat
tatgccgagcagcaacgctggctggagcaccgccgccaggtcttcacgccagagttttta
cagggttatgcagatgaattgcagatgctggcacaacaatatgccgatgacaaagagaaa
gtggcgctgttaaaagcgctttggcagtacgcggaagagatcgtctaa

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