KEGG   Escherichia coli LY180: LY180_13480
Entry
LY180_13480       CDS       T02846                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
ecol  Escherichia coli LY180
Pathway
ecol00250  Alanine, aspartate and glutamate metabolism
ecol00310  Lysine degradation
ecol00350  Tyrosine metabolism
ecol00650  Butanoate metabolism
ecol00760  Nicotinate and nicotinamide metabolism
ecol01100  Metabolic pathways
ecol01120  Microbial metabolism in diverse environments
Module
ecol_M00027  GABA (gamma-Aminobutyrate) shunt
ecol_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ecol00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    LY180_13480 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    LY180_13480 (gabD)
   00310 Lysine degradation
    LY180_13480 (gabD)
   00350 Tyrosine metabolism
    LY180_13480 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    LY180_13480 (gabD)
Enzymes [BR:ecol01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     LY180_13480 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     LY180_13480 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     LY180_13480 (gabD)
SSDB
Motif
Pfam: Aldedh
Other DBs
NCBI-GeneID: 16980366
NCBI-ProteinID: AGW09798
Position
2841428..2842876
AA seq 482 aa
MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtacccaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgct
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgtctgatgaccctcgaacagggtaaa
ccgctggctgaagcgaaaggtgaaatcagctacgccgcctcctttattgagtggtttgct
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgttaccgccgccatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaaa
cccgccagtcagacgccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggggtatttaacgtggtcaccggttcggcgggcgcagtcggtaacgaactg
accagcaacccgctggtgcgcaaactgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacaatgcgcgaaagacatcaaaaaagtgtcgctggagctcggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggcgcgctggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcagtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggcgcgcgcgtggtttgcggcggtaaagca
cacgaacgtggcggcaacttcttccagccgaccattctggtggacgttccggccaacgct
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgatcgcgcaagccaatgacaccgaatttggtcttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccgggattatttccaatgaagtggccccgttcggcggcatcaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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