KEGG T03010: ECRM13514

Escherichia coli O145 H28 RM13514 (EHEC): ECRM13514_0986

Entry

ECRM13514_0986    CDS       T03010

Symbol

clpA

Name

(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA

K03694

ATP-dependent Clp protease ATP-binding subunit ClpA

Organism

ecoo Escherichia coli O145:H28 RM13514 (EHEC)

Brite

KEGG Orthology (KO) [BR:ecoo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ecoo03110]
    ECRM13514_0986 (clpA)
Chaperones and folding catalysts [BR:ecoo03110]
Heat shock proteins
  HSP100
   ECRM13514_0986 (clpA)

SSDB

Motif

Pfam:

AAA_2 AAA_lid_9 ClpB_D2-small AAA AAA_5 Clp_N Sigma54_activat AAA_16 AAA_22 TniB ResIII RuvB_N TIP49 AAA_7 AAA_14 AAA_18 nSTAND3 AAA_3 AAA_6 IstB_IS21 TsaE AAA_25 bpMoxR NACHT Rad17 IPT

Other DBs

NCBI-ProteinID:

AHG07673

Position

1010101..1012377

AA seq 758 aa
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA
FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA
AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA
RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM
ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ
VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING
LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT
VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG
LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY
VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV
LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ
VVDKFIVELQVQLDQKGVSLEVSQEARNWLADKGYDRAMGARPMARVIQDNLKKPLANEL
LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH

NT seq 2277 nt +upstreamnt +downstreamnt
atgctcaatcaagaactggaactcagtttaaatatggctttcgccagagcgcgcgagcac
cgtcatgagtttatgaccgtcgagcacttgttactggcgctgctcagtaacccatctgcc
cgggaggcgctggaagcgtgttctgtggatttggttgcgctccgtcaggaactggaagcc
tttattgaacaaaccacacccgttctgcctgccagtgaagaggagcgcgacacacagccg
acgcttagttttcagcgtgtactgcaacgtgcggtcttccatgtccagtcctccggtcgc
aatgaggttaccggtgcaaacgttctggtcgctatctttagcgaacaggagtcgcaggcg
gcatatctgttgcgtaaacatgaagtcagccgtctcgatgtggtgaactttatctctcat
ggcacgcgtaaagacgagccgacacagtcttctgatcctggcagccagccaaacagcgaa
gaacaagctggtggggaggaacgtatggagaatttcacgacgaacctgaatcagcttgcg
cgcgtgggcggaatcgacccactgattggtcgtgagaaggagctggagcgtgctattcag
gttctctgccgtcgccgtaaaaacaacccgctgctagtgggggaatctggtgtcggtaaa
accgcgattgcagaaggtcttgcctggcgaattgttcagggcgatgtgccggaagtgatg
gctgactgtacgatttactctctcgatatcggttctctgttagcgggcacaaaatatcgc
ggcgactttgaaaaacgttttaaagcgttgctcaagcagctggagcaggacactaacagc
atcctgtttattgatgagatccacaccattatcggtgcgggtgcagcgtctggtggtcag
gtcgatgcggctaacctaatcaaaccgttgctctccagcggtaaaattcgcgtaattggt
tcgacaacctatcaggagttcagcaacattttcgagaaagaccgtgctctggcgcgtcgc
ttccagaaaattgatattactgaaccgtcgatcgaagaaactgttcaaatcatcaatggc
ctgaaaccgaagtatgaagcgcaccacgacgtgcgttataccgcaaaagcggtgcgtgcg
gcggtagagctggcggtgaaatacattaacgatcgtcatctgccggataaagcgattgat
gttatcgacgaagcgggcgctcgcgcacgtctgatgccggtaagcaaacgcaagaaaacc
gttaatgtggcggatattgagtccgtggtggcccgtattgcacgcattccagagaagagt
gtttctcagagtgatcgtgataccctgaaaaaccttggcgatcgcctgaaaatgctggtc
ttcggtcaggataaagccattgaggcgctgactgaagccattaagatggcgcgtgcaggt
ttaggtcacgaacataaaccggtcggttcgttcctgtttgccggccctaccggggtcggg
aaaacagaggtgacggtacagctttcgaaagcgttgggcattgagcttctgcgctttgat
atgtccgagtatatggaacgccataccgtcagccgtcttattggtgcgcctccgggatac
gttggttttgatcagggcggtttgctgactgatgcggtcatcaagcatccacatgcggtg
ctgctgctggacgaaatcgagaaagcgcacccggacgtgttcaatattctgttgcaggtg
atggacaacggtacgctgaccgataacaacggacgcaaagcggacttccgtaacgtggtg
ctggtgatgaccaccaacgccggggtacgggaaactgagcgcaaatccattggtcttatc
caccaggataacagcaccgatgcgatggaagagatcaagaagatctttacaccggaattc
cgtaaccgtctcgacaacattatctggttcgatcatctgtcaactgacgtgatccatcag
gtggtggataaattcatcgtcgagttgcaggttcagctggatcagaaaggtgtttctctg
gaagtgagccaggaagcgcgtaactggctggccgataaaggttacgaccgggcaatgggc
gcacgtccgatggcgcgtgtcatccaggacaacctgaaaaaaccgctcgccaacgaactg
ctgtttggttcgctggtggacggcggtcaggtcaccgtcgcgctggataaagagaaaaat
gagctgacttacggattccagagtgcacaaaagcacaaggcggaagcagcgcattaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (32)   

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