KEGG   Escherichia coli O81 ED1a (commensal): ECED1_4498
Entry
ECED1_4498        CDS       T00827                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ecq  Escherichia coli O81 ED1a (commensal)
Pathway
ecq03420  Nucleotide excision repair
ecq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ECED1_4498 (uvrD)
   03430 Mismatch repair
    ECED1_4498 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecq03400]
    ECED1_4498 (uvrD)
Enzymes [BR:ecq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECED1_4498 (uvrD)
DNA repair and recombination proteins [BR:ecq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ECED1_4498 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     ECED1_4498 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: CAR10617
UniProt: B7MR33
Position
4433886..4436048
AA seq 720 aa
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDTEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggttgatgagcgtggaaaactgctcgccgtattcgattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcaactgatgggcact
agccagggcggtatgtgggtcggcaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacactgaagaccagcta
cgtctgcttaagcgtttgatcaaggcgatgaatctcgacgagaagcagtggccgccgcgt
caggcaatgtggtacatcaacagccagaaagatgaggggctgcgtccgcatcatattcag
agctacggcaacccagtggagcaaacctggcagaaggtgtatcaggcgtatcaggaagcc
tgtgaccgcgcgggtctggttgattttgctgaattgctgcttcgtgcccacgaattatgg
ctcaacaaaccgcatatccttcaacattaccgcgaacgtttcaccaatatcctggtggat
gaattccaggacactaacaacattcagtacgcgtggatccgactgctggcaggcgatact
ggcaaagtgatgatcgttggcgatgacgaccagtcaatctacggctggcgcggggcgcag
gtcgagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgctaacgccctgattgaaaacaat
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgcttgccgagtgcgccattctctaccgcagcaacgcccagtcg
cgtgtgctggaagaggcgttattgcaggcgagtatgccgtatcgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgcaacgacgacgcggcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgttggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggagctgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtgcagttgatgacgctacac
tcggcgaaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcagcgtatgggt
acgccgatggtcgagaacgacagcggctataagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggcgagcatagccgtttgcaggtg
gcattccagggccagggtattaaatggctggtggcggcttacgcccgactggagacggta
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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