KEGG E.coli_APEC: APECO1

Escherichia coli O1 (APEC): APECO1_1508

Entry

APECO1_1508 CDS E.coli_APEC

Gene name ybbU

Definition DNA-binding transcriptional repressor AllR

Orthology K10973 IclR family transcriptional regulator, negative regulator of
allantoin and glyoxylate utilization operons

Class Genetic Information Processing; Transcription; Transcription factors

SSDB

Motif Pfam: IclR HTH_IclR HTH_5
PROSITE: HTH_ICLR ICLR_ED

Other DBs NCBI-GI: 117622763
NCBI-GeneID: 4493619
UniProt: A1A8H2

Position 545350..546165

AA seq 271 aa
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRL
LKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVA
IRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQ
FTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSS
RLTEDRFVSQGELVRDTARDISTALGLKAHL

NT seq 816 nt +upstreamnt +downstreamnt
atgacggaagttagacggcgcggcaggccaggacaggcggagcctgtggcacagaagggt
gcacaggcgttagagcggggaattgcgattctgcaatatctggaaaaaagtgggggaagt
tcgtcggttagcgatatctctctcaatctggatttgccgctctccacgacctttcgcttg
ctgaaggttttacaggcagcggattttgtctatcaggacagtcagttaggttggtggcat
ataggattaggtgtctttaacgtcggtgcagcgtacatccataaccgcgatgtcctctcc
gtcgccgggccgtttatgcgccgcctgatgttactttccggcgaaacggtcaatgtcgcg
atccgtaacggcaatgaagcggtattaattggtcagttagagtgtaaatcgatggtcaga
atgtgtgcgccgctgggcagtcgtctgccgctgcatgcttccggtgcgggcaaggcgctg
ctttatccgctggcggaagaagagttgatgagcatcattctgcaaaccggtttgcagcag
tttacgccaacgacgcttgtggatatgcccaccttgctgaaggacctggaacaagcgcgt
gaactgggctataccgtagataaagaagagcatgttgtcggcctgaattgcatagcttca
gcaatttacgatgatgtaggtagtgttgttgccgctatctccatctccgggccttcatca
agactgacagaagatcgttttgtcagtcagggtgagctggtcagagacaccgcccgcgat
atcagcacggcgttgggactgaaagcacatctatag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (14)

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