KEGG E.coli_APEC: APECO1

Escherichia coli O1 (APEC): APECO1_3678

Entry

APECO1_3678 CDS E.coli_APEC

Gene name thyA

Definition thymidylate synthase (EC:2.1.1.45)

Orthology K00560 thymidylate synthase [EC:2.1.1.45]

Pathway ecv00240 Pyrimidine metabolism
ecv00670 One carbon pool by folate
ecv01100 Metabolic pathways

Class Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:ecv00240]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:ecv00670]

SSDB

Motif Pfam: Thymidylat_synt
PROSITE: THYMIDYLATE_SYNTHASE

Other DBs NCBI-GI: 117625080
NCBI-GeneID: 4492249
UniProt: A1AF39

Structure

PDB: 2G8M 2G8O 3BHL 1QQQ 2FTN 2A9W 1EV5 1EVF
     1AXW 1KZI 1F4B 1F4G 1TYS 2FTQ 2G8X 3BHR
     1F4E 1TRG 3BGX 1TSD 2TSC 2FTO 1JG0 1F4C
     1F4F 1EVG 1KCE 1SYN 1AOB 1BDU 1DDU 1TDU
     1TLC 3TMS 1F4D 3BFI 1JTU 1FWM 1BQ2 1DNA
     1BID 1TJS 2KCE 1AIQ 1TSN 1BJG 2BBQ 1AJM
     3B9H 1JTQ 1BQ1 1ZPR 1KZJ 1EV8 1AN5 1TLS
     3B5B 1JUT 1FFL 2VF0 2VET

Position complement(3171893..3172687)

AA seq 264 aa
MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELL
WFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLK
NDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS
YALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF
DYRFEDFEIEGYDPHPGIKAPVAI

NT seq 795 nt +upstreamnt +downstreamnt
atgaaacagtatttagaactgatgcaaaaagtgctcgacgaaggcacacagaaaaacgac
cgtaccggaaccggaacgctttccatttttggtcatcagatgcgttttaacctgcaggat
ggattcccgctggtgacaactaaacgttgccacctgcgttccatcatccacgaactgctg
tggttcctgcagggcgacactaacattgcttatctacacgaaaacaatgtcaccatctgg
gacgaatgggccgatgaaaacggcgacctcgggccagtgtatggtaaacagtggcgcgcc
tggccaacgccggatggtcgtcatattgaccagatcactactgtactgaaccagctgaaa
aacgacccggattcccgtcgcattattgtttcagcgtggaacgtaggcgaactggataaa
atggcgctggcaccgtgccatgcattcttccagttctatgtggcagacggcaaactctct
tgccagctttatcagcgctcctgtgacgtcttcctcggcctgccgttcaacattgccagc
tacgcgttactggtgcatatgatggcgcagcagtgcgatctggaagtgggtgattttgtc
tggaccggtggcgacacgcatctctacagcaaccatatggatcaaactcatctgcaatta
agccgcgaaccgcgtccgctgccgaagttgattatcaaacgtaaacccgaatccatcttc
gactaccgtttcgaagactttgagattgaaggatacgatccacatccgggcattaaagcg
ccggtggctatctaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (61)   
   PDB (61)   
Protein domain (2)   
   Pfam (1)   
   PROSITE (1)   
All databases (76)

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