KEGG   Escherichia coli APEC O1 (APEC): APECO1_3964
Entry
APECO1_3964       CDS       T00425                                 
Symbol
rnc
Name
(GenBank) RNase III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ecv  Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecv03019]
    APECO1_3964 (rnc)
   03009 Ribosome biogenesis [BR:ecv03009]
    APECO1_3964 (rnc)
   03036 Chromosome and associated proteins [BR:ecv03036]
    APECO1_3964 (rnc)
Enzymes [BR:ecv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     APECO1_3964 (rnc)
Messenger RNA biogenesis [BR:ecv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     APECO1_3964 (rnc)
Ribosome biogenesis [BR:ecv03009]
 Eukaryotic type
  90S particles
   RNase
    APECO1_3964 (rnc)
 Prokaryotic type
  rRNA processing factors
   APECO1_3964 (rnc)
Chromosome and associated proteins [BR:ecv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     APECO1_3964 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ABJ01987
UniProt: A1AE97
Position
complement(2857463..2858143)
AA seq 226 aa
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaacccatcgtagcgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaacgcgctttatcaccgtttc
cctcgtgtcgatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcagaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaacccgtctggacgaaattagcccaggagataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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