KEGG E.coli_HS: EcHS

Escherichia coli O9 HS (commensal): EcHS_A0370

Entry

EcHS_A0370 CDS E.coli_HS

Gene name betA

Definition choline dehydrogenase (EC:1.1.99.1)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway ecx00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:ecx00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Lycopene_cycl
Pyr_redox_2 HI0933_like
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 157159823
NCBI-GeneID: 5592815
UniProt: A7ZWV4

Position complement(382917..384587)

AA seq 556 aa
MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY
NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD
CLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQ
QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEG
DSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHL
EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNI
QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD
WQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKM
GYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRS
TAGYFVANGMPVRAKK

NT seq 1671 nt +upstreamnt +downstreamnt
ttgcaatttgactacatcattattggtgccggctcagccggcaacgttctcgctacccgt
ctgactgaagatccgaatacctccgtgctgctgcttgaagcgggcggcccggactatcgc
tttgacttccgcacccagatgcccgcagcgctggcgttcccactacagggcaaacgctac
aactgggcctatgaaacagagcctgaaccgtttatgaataaccgccgcatggagtgcgga
cgcggtaaaggcctgggtggatcgtcgctgatcaacggcatgtgctacatccgtggcaat
gcgctggatctcgataactgggcgcaagaacccggtctggagaactggagttatctcgac
tgcctgccctactaccgcaaggccgagactcgcgatgtgggcgagaacgactaccacggt
ggcgatggcccggtgagcgtcaccacctccaaacccggcgtcaatccgctgtttgaagcg
atgattgaagcgggcgtgcaggcaggctacccgcgcacggacgatctcaacggctatcag
caggaaggttttggcccgatggatcgcaccgtcacgccgcagggccgtcgcgccagtacc
gcgcgcggttatctcgatcaggccaaatcgcgccctaacctgaccattcgtactcacgct
atgaccgatcacatcatttttgacggcaaacgcgcggtgggcgtcgaatggctggaaggc
gacagcaccatcccaacccgcgcaacggccaacaaagaagtgctgttatgtgcaggcgcg
attgcctcaccgcagatcctgcaacgctccggcgtcggcaacgctgaactgctggcggag
tttgatattccgctggtgcatgaattacccggcgtcggcgaaaatcttcaggatcatctg
gagatgtatctgcaatatgagtgcaaagaaccggtttccctctaccctgccctgcagtgg
tggaaccaaccgaaaatcggtgcggagtggctgtttggcggcactggcgttggtgccagc
aaccactttgaagcaggtggatttattcgcagccgtgaggaatttgcgtggccgaatatt
cagtaccatttcctgccagtagcgattaactataacggctcgaatgcagtgaaagagcac
ggtttccagtgccacgtcggctcaatgcgctcgccaagccgtgggcatgtgcggattaaa
tcccgcgacccgcaccagcatccggcgattctgtttaactacatgtcgcacgagcaggac
tggcaggagttccgcgacgcaattcgcatcacccgggagatcatgcatcaaccggcgctg
gatcagtatcgtggccgcgaaatcagccccggcacggaatgtcagacggatgaacagctc
gatgagttcgtgcgtaatcacgccgaaaccgccttccatccgtgcggtacctgcaaaatg
ggctacgacgagatgtccgtggttgacggcgaaggccgcgtacacgggttagaaggcctg
cgtgtggtggatgcgtcgattatgccgcagattatcaccgggaatttgaacgccacgaca
attatgattggcgagaaaatagcggatatgattcgtggacaggaagcgctgccgaggagc
acggcgggatattttgtggcaaatgggatgccggtgagagcgaaaaaatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (20)

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