KEGG T00784: ECSE

Escherichia coli O152 H28 SE11 (commensal): ECSE_0785

Entry

ECSE_0785 CDS T00784

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

ecy Escherichia coli O152:H28 SE11 (commensal)

Pathway

ecy00020	Citrate cycle (TCA cycle)
ecy00310	Lysine degradation
ecy00380	Tryptophan metabolism
ecy01100	Metabolic pathways
ecy01110	Biosynthesis of secondary metabolites
ecy01120	Microbial metabolism in diverse environments

Module

ecy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ecy_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ecy00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:ecy00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:ecy00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

209917976

NCBI-GeneID:

6999156

UniProt:

B6I7Z7

Structure

PDB:

2JGD

Position

841074..843875

AA seq 933 aa
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS
QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV
ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE
KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK
EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG
FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV
TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF
HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH
PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE
WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA
YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS
EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH
GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS
LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV
AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR
YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE

NT seq 2802 nt +upstreamnt +downstreamnt
atgcagaacagcgctttgaaagcctggttggactcttcttacctctctggcgcaaaccag
agctggatagaacagctctatgaagacttcttaaccgatcctgactcggttgacgctaac
tggcgttcgacgttccagcagttacctggtacgggagtcaaaccggatcaattccactct
caaacgcgtgaatatttccgccgcctggcgaaagacgcttcacgttactcttcaacgatc
tccgaccctgacaccaatgtaaagcaggttaaagtcctgcagctcattaacgcataccgc
ttccgtggtcaccagcatgcgaatctcgatccgctgggactgtggcagcaagataaagtg
gccgatctggatccgtctttccacgatctgaccgaagcagacttccaggagaccttcaac
gtcggttcatttgccagcggcaaagaaaccatgaaactcggcgagctgctggaagccctc
aagcaaacctactgcggcccgattggtgccgagtatatgcacattaccagcaccgaagaa
aaacgctggatccaacagcgtatcgagtctggtcgcgcgactttcaatagcgaagagaaa
aaacgcttcttaagcgaactgaccgccgctgaaggccttgaacgttacctcggcgcaaaa
ttccctggcgcaaaacgcttctcgctggaaggcggtgacgcgttaatcccgatgcttaaa
gagatgatccgccacgctggcaacagcggcacccgggaagtggttctcgggatggcgcac
cgtggtcgtctgaacgtgttggtgaacgtgctgggtaaaaaaccgcaagacttgttcgac
gagtttgccggtaaacataaagaacacctcggcacgggtgacgtgaaataccacatgggc
ttctcgtctgacttccagaccgatggcggcctggtgcacctggcgctggcgtttaacccg
tctcaccttgagattgtaagcccggtcgttatcggctctgttcgtgcccgtctggacaga
cttgatgagccgagcagcaacaaagtgctgccaattaccatccacggtgacgccgcagtg
accggacagggcgtggttcaggaaaccctgaacatgtcgaaagcgcgtggttatgaagtt
ggcggtacggtacgtatcgttatcaacaaccaggttggtttcaccacctctaatccgctg
gatgcccgttctacgccgtactgtactgatatcggcaagatggttcaggcaccgattttc
cacgttaacgcggacgatccggaagccgttgcctttgtgacccgtctggcgctcgatttc
cgtaacacctttaaacgtgatgtcttcatcgacctggtatgctaccgccgtcacggccac
aacgaagccgacgagccgagcgcaacccagccgctgatgtatcagaaaatcaaaaaacat
ccgacaccgcgcaaaatctacgctgacaagctggagcaggaaaaagtggcgacgctggaa
gatgccaccgagatggttaacctgtaccgcgatgcgctggatgctggcgattgcgtggta
gcagagtggcgtccgatgaacatgcactctttcacctggtcgccgtacctcaaccacgaa
tgggacgaagagtacccgaacaaagttgagatgaagcgcctgcaggaactggctaaacgc
atcagcacggtgccggaagcggttgaaatgcagtctcgcgttgccaagatttatggcgat
cgccaggcgatggctgccggtgagaaactgttcgactggggcggcgcggaaaacctcgct
tacgccacgctggttgacgaaggcattccggttcgcctgtcgggtgaagactccggtcgc
ggtaccttcttccaccgccacgcggtgatccacaaccagtctaacggttccacttacacg
ccgctgcaacacatccataacggccagggcgcgttccgtgtttgggactccgtactgtct
gaagaagcagtgctggcgtttgaatacggttatgccaccgcagaaccacgcaccctgacc
atctgggaagcgcagttcggtgacttcgccaacggtgcgcaggtggttatcgaccagttc
atctcctctggcgagcagaaatggggccggatgtgtggtctggtgatgttgctgccgcac
ggttacgaagggcaggggccggagcactcctccgcgcgtctggaacgttatctgcaactt
tgtgctgagcaaaacatgcaggtttgcgtaccgtctaccccggcacaggtttaccacatg
ctgcgtcgtcaggcgctgcgcgggatgcgtcgtccgctggtcgtgatgtcgccgaaatcc
ctgctgcgtcatccgctggcggtttccagcctcgaagaactggcgaacggcaccttcctg
ccagccatcggtgaaatcgacgagcttgatccgaagggcgtgaagcgcgtagtgatgtgt
tctggtaaggtttattacgacctgctggaacagcgtcgtaagaacaatcaacacgatgtc
gccattgtgcgtatcgagcaactctacccgttcccgcataaagcgatgcaggaagtgttg
cagcagtttgctcacgtcaaggattttgtctggtgccaggaagagccgctcaaccagggc
gcatggtactgcagccagcatcatttccgtgaagtgattccgtttggggcttctctgcgt
tatgcaggccgcccggcctccgcctctccggcggtagggtatatgtccgttcaccagaaa
cagcaacaagatctggttaatgacgcgctgaacgtcgaataa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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