KEGG T00830: ECS88

Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_4538

Entry

ECS88_4538 CDS T00830

Gene name

sucD

Definition

succinyl-CoA synthetase subunit alpha (EC:6.2.1.4)

Orthology

K01902

succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]

Organism

ecz Escherichia coli O45:K1:H7 S88 (ExPEC)

Pathway

ecz00020	Citrate cycle (TCA cycle)
ecz00640	Propanoate metabolism
ecz00660	C5-Branched dibasic acid metabolism
ecz01100	Metabolic pathways
ecz01110	Biosynthesis of secondary metabolites
ecz01120	Microbial metabolism in diverse environments

Module

ecz_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ecz_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ecz00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:ecz00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:ecz00660]

SSDB

Motif

Pfam:

CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 GFO_IDH_MocA

Other DBs

NCBI-GI:

218561134

NCBI-GeneID:

7131238

UniProt:

B7MJ54

Position

4517912..4518784

AA seq 290 aa
MSVLINKHTRVLVQGITGKNGTFHTEQAIAYGTQIVGGVTPGKGGQRHLDRPVFDSMKEA
MRQTEADASVIYVPAPFVLDSVVEAIEAGVKLVVVITEGVPTLDMVKVRRLLDCHPDVRL
IGPNCPGVITPGECKIGIMPGEIHRPGRIGIVSRSGTLTYEAVAQTTALGLGQSTCIGIG
GDPVPGTNFIDALRLFENDPQTDAVIMIGEIGGNAEERAAEFIRHEMNKPVVGYIAGVTA
PKGKRMGHAGAIISGGSGSAEDKFRAFDKAGMAWTRNPALLGETLWNVIK

NT seq 873 nt +upstreamnt +downstreamnt
atgagcgttttgatcaacaaacacacgcgggtactggtgcagggcattaccggcaaaaac
ggcacatttcatacagagcaggctattgcgtatggcacgcagattgtgggtggagtgacg
ccaggtaagggcgggcaacggcatctggatcgcccggtttttgattcaatgaaagaagcg
atgcgacaaactgaggctgatgccagcgtgatttatgtgcctgcaccgtttgtgctggat
tctgttgttgaggctattgaagctggcgtcaaattggttgtggtgatcactgaaggtgta
ccgacactggatatggtgaaagttcgtcggctgcttgactgccacccggatgtgcggctg
attgggccaaactgcccaggagttatcacgccgggcgagtgcaaaatcgggattatgcct
ggtgaaatccaccgcccagggcgtattgggattgtttcccgctccggtacattaacctac
gaagctgtagcgcaaaccacggcgctgggacttgggcaatccacctgtattggtattggc
ggcgatccggttccggggactaactttattgatgcgctgcgtttattcgaaaatgatccg
caaacagacgcggtaattatgatcggtgaaattggtggtaatgcggaagaacgggctgcg
gaatttattcgtcatgaaatgaataaaccggtcgtaggttatattgccggtgttactgca
ccaaaaggaaaacgcatggggcacgccggagccattatttctggcggtagcggcagtgca
gaggataaattccgtgcgttcgataaagcaggcatggcatggacaagaaacccggcgttg
cttggcgaaacgttatggaatgttattaagtaa

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system