KEGG   Escherichia coli DH1: ECDH1ME8569_2005
Entry
ECDH1ME8569_2005  CDS       T02102                                 
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
edj  Escherichia coli DH1
Pathway
edj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:edj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ECDH1ME8569_2005 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:edj03400]
    ECDH1ME8569_2005 (alkA)
Enzymes [BR:edj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     ECDH1ME8569_2005 (alkA)
DNA repair and recombination proteins [BR:edj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ECDH1ME8569_2005 (alkA)
SSDB
Motif
Pfam: AlkA_N HhH-GPD HHH_5
Other DBs
NCBI-ProteinID: BAJ43861
Position
complement(2130494..2131342)
AA seq 282 aa
MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLH
INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRA
ILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAE
ALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA
NT seq 849 nt   +upstreamnt  +downstreamnt
atgtataccctgaactggcagccgccgtatgactggtcgtggatgttgggatttctcgcc
gcccgtgcggtgagcagtgtggaaacggtcgcggacagttattatgcccgtagtctggcg
gtgggcgaatatcgcggcgtggtgactgctattccggatatagcccgccatactctgcac
ataaatttaagtgcaggtttagaacctgttgccgcagagtgtctggcgaaaatgagccgc
ctgtttgatctgcaatgtaacccacaaattgttaacggtgcgttgggcaggttaggcgcg
gcgcggcccggattgcgtttacccggctgtgttgatgcttttgagcagggcgtgcgggcg
attttaggccaactggtgagcgtggcgatggcggcaaaattgaccgccagagtggcacag
ctttatggcgaacggctggatgattttccggagtatatctgcttcccgacgcctcagcgg
ctggcagcagcagacccgcaggcattaaaagcgttaggtatgccgttgaaacgggcagag
gcgctgattcatctggcaaatgcggcgctggagggcaccttaccaatgacaataccgggc
gatgtggagcaggcgatgaaaacgctgcaaacttttccgggtatcgggcgctggacggcg
aattattttgctttgcgtggctggcaggcgaaagatgttttcctgccggatgattatctg
attaaacagcgatttccgggaatgacaccggcgcaaatccgccgttatgccgagcgctgg
aagccctggcgttcttatgcgctgttgcatatctggtatacggaaggctggcaaccagac
gaagcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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