KEGG   Escherichia coli DH1: ECDH1ME8569_4227
Entry
ECDH1ME8569_4227  CDS       T02102                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
edj  Escherichia coli DH1
Pathway
edj03030  DNA replication
edj03430  Mismatch repair
edj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:edj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECDH1ME8569_4227 (holD)
   03430 Mismatch repair
    ECDH1ME8569_4227 (holD)
   03440 Homologous recombination
    ECDH1ME8569_4227 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:edj03032]
    ECDH1ME8569_4227 (holD)
   03400 DNA repair and recombination proteins [BR:edj03400]
    ECDH1ME8569_4227 (holD)
Enzymes [BR:edj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECDH1ME8569_4227 (holD)
DNA replication proteins [BR:edj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECDH1ME8569_4227 (holD)
DNA repair and recombination proteins [BR:edj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECDH1ME8569_4227 (holD)
SSDB
Motif
Pfam: DNA_III_psi CSTF_C
Other DBs
NCBI-ProteinID: BAJ46083
Position
4587581..4587994
AA seq 137 aa
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA
LTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAA
LWQQICTYEHDFFPRND
NT seq 414 nt   +upstreamnt  +downstreamnt
atgacatcccgacgagactggcagttacagcaactgggcattacccagtggtcgctgcgt
cgccctggcgcgttgcagggggagattgccattgcgatcccggcacacgtccgtctggtg
atggtggcaaacgatcttcccgccctgactgatcctttagtgagcgatgttctgcgcgca
ttaaccgtcagccccgaccaggtgctgcaactgacgccagaaaaaatcgcgatgctgccg
caaggcagtcactgcaacagttggcggttgggtactgacgaaccgctatcactggaaggc
gctcaggtggcatcaccggcgctcaccgatttacgggcaaacccaacggcacgcgccgcg
ttatggcaacaaatttgcacatatgaacacgatttcttccctcgaaacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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