KEGG T03991: QY76

Edwardsiella sp. EA181011: QY76_05925

Entry

QY76_05925        CDS       T03991

Symbol

truD

Name

(GenBank) tRNA pseudouridine synthase D

K06176

tRNA pseudouridine13 synthase [EC:5.4.99.27]

Organism

edw Edwardsiella sp. EA181011

Brite

KEGG Orthology (KO) [BR:edw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:edw03016]
    QY76_05925 (truD)
Enzymes [BR:edw01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     QY76_05925 (truD)
Transfer RNA biogenesis [BR:edw03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    QY76_05925 (truD)
Prokaryotic type
    QY76_05925 (truD)

SSDB

Motif

Pfam:

TruD

Other DBs

NCBI-ProteinID:

AKM46941

Position

1334041..1335087

AA seq 348 aa
MEFSTLQYLHGRPAATGVVKAFAEDFFVAEDLGFAPDGEGEHVLVRLRKEGCNTQFVAEN
LARFARIAARSVSYAGLKDRHAVTEQWFCLHLPGRDTPDFSQFVLEGCQVLTVARHRKKL
RIGTLRGNQFRLVLHHISDSAEVEERLRRVAAQGVPNYFGEQRFGRGGNNLQQARRWATD
QIRVKERAKRGFYLSAARSALFNRLVSERLAAGCFSRALAGDALQLTGRGSWFVAQEAEL
AALQQRLDAGELRITAALPGDGDGGVAGDAAEFERRVLSEYADLQALLTRERVEPARRAV
LLQPQVMAWNWWDDATVELTFDLPAGSFATSVVRELFCQENPDADLAE

NT seq 1047 nt +upstreamnt +downstreamnt
atggagttttccacgctgcagtatctgcacgggcgcccggcggcgaccggggtggtcaag
gcgttcgccgaggattttttcgtcgcggaggatctggggtttgccccggacggcgagggt
gagcatgtgctggttcgtctgcgtaaagaggggtgcaatacccagtttgtggcggagaat
ctggcccgctttgcccgtatcgccgcgcgctcggtcagctacgccggcctgaaggatcgt
catgcggtgaccgagcagtggttctgcctgcacctgccggggcgtgataccccagacttc
agccagtttgtgctggaggggtgccaggtcctgaccgtggctcgccaccggaagaagctg
cgtatcggtacgctgcgcggcaaccagttccgcctggtactgcatcatatcagcgatagc
gccgaggtcgaagagcgcctgcgtcgggtggcggcacagggcgtgcccaactatttcggc
gagcagcgctttggccgcggcggcaataacctgcagcaggcgcgtcgctgggccaccgat
cagattcgggtgaaagagcgcgccaagcgcggtttctatctctccgcggcgcgcagcgcg
ctgtttaatcggctggtgagcgagcggctggcggcgggctgtttttctcgagccctggcc
ggcgatgcgctgcagctgaccggtcgcggcagctggtttgtcgcccaggaggcggagctg
gcggcgctgcagcagcggctggacgccggcgagctgcgcattacggcggcgctgccgggc
gacggtgacggcggcgtcgccggcgatgcggcggagtttgaacgtcgcgtgctgtctgag
tatgctgatctgcaggccctgctgacgcgtgagcgggtagagccggcgcgccgtgcggtg
ctgctgcagccgcaggtgatggcctggaactggtgggatgacgccaccgtcgagctgacc
ttcgatctgcccgccggtagtttcgccaccagcgtggtgcgtgaactgttctgtcaggaa
aaccccgatgcggatcttgctgagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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