KEGG   Enterococcus faecalis DENG1: DENG_00771
Entry
DENG_00771        CDS       T03043                                 
Symbol
ligA
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
efn  Enterococcus faecalis DENG1
Pathway
efn03030  DNA replication
efn03410  Base excision repair
efn03420  Nucleotide excision repair
efn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:efn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DENG_00771 (ligA)
   03410 Base excision repair
    DENG_00771 (ligA)
   03420 Nucleotide excision repair
    DENG_00771 (ligA)
   03430 Mismatch repair
    DENG_00771 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:efn03032]
    DENG_00771 (ligA)
   03400 DNA repair and recombination proteins [BR:efn03400]
    DENG_00771 (ligA)
Enzymes [BR:efn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DENG_00771 (ligA)
DNA replication proteins [BR:efn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DENG_00771 (ligA)
DNA repair and recombination proteins [BR:efn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DENG_00771 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DENG_00771 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     DENG_00771 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DENG_00771 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT BRCT_2 HTH_45
Other DBs
NCBI-ProteinID: AHI39825
Position
665399..667429
AA seq 676 aa
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI
TPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELK
IDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPISVEVRGECYMPK
QSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ
FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFVLQDE
LGFTVKAPRWAIAYKFPPEEAETVVEDIEWTIGRTGVVTPTAVMAPVRVAGTTVSRASLH
NADFIQMKDIRLNDHVIIYKAGDIIPEVAQVLVEKRAADSQPYEMPTHCPICHSELVHLD
EEVALRCINPKCPAQIKEGLNHFVSRNAMNIDGLGPRVLAQMYDKGLVKDVADLYFLTEE
QLMTLDKIKEKSANNIYTAIQGSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLPTLSR
ATAEEIVALDSIGETIADSVVTYFENEEVHELMAELEKAQVNLTYKGLRTEQLAEVESPF
KDKTVVLTGKLTQYTREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAESLGVS
VWNEQEMVDALDASHF
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggaacaacaaccattaacattaacggcggcgacaactcgtgcgcaagaattaagaaaa
caactcaatcaatattcccatgaatattatgtcaaagatcaaccatccgtagaagattat
gtttacgatcgtttgtataaagagttagtcgatattgaaacggagtttcctgatttaatc
acgccagattcgccgacacaacgtgtaggtggcaaagttttatctggttttgaaaaagct
ccgcatgacattccaatgtatagtttaaatgatgggtttagcaaggaagacatttttgct
tttgatgaacgtgttcgtaaggcgattggtaaacccgttgcttactgttgcgagttgaaa
attgatgggttagcaatttcattacgttatgaaaacggggtgtttgtacgcggagcaaca
cgaggcgatggaacggttggtgaaaacattacagagaacttacgaacggttcgctctgta
ccgatgcgtttaacggagcccatttcagtggaagttcgtggcgagtgctacatgcctaaa
caatcctttgtcgcgttgaatgaagaacgtgaagaaaatggccaagatatttttgccaat
cctcggaatgcagcggcgggaagcttgcgccaattagacacaaaaattgtggcaaaacgg
aacttaaatacgtttttatacacagttgctgactttggaccaatgaaagcgaagacgcag
tttgaggcattagaagagctttctgcaattggttttagaaccaatcccgaacggcaatta
tgtcagtcaatcgatgaagtttgggcctacattgaagaataccatgaaaagcggagcact
ttgccatacgaaatcgatggaattgtgattaaagtgaacgaatttgtgttgcaagatgaa
ttaggtttcactgtcaaagcacctcgctgggcgattgcctacaaatttccaccagaagaa
gcagagacagtagtggaagatattgaatggacaattgggcgcacgggagtggtcactcct
actgcggtcatggctcctgtacgagtcgcgggaaccacggttagtcgggcaagtttgcat
aatgcagattttattcaaatgaaagatatccgtttaaatgatcatgttattatttacaaa
gccggcgatattatcccagaagtagcgcaagtcctagttgaaaaacgtgcagccgatagt
cagccttatgaaatgccgacacattgtccaatttgtcatagtgagttggtgcatttagat
gaggaagtggcgttacgttgtattaatccaaaatgccctgcgcaaattaaagaagggctg
aatcactttgtctcacgaaacgcaatgaacattgatggcttggggccacgagtgttagca
caaatgtatgacaaaggattagtgaaagacgtagcggatctgtatttcttaacagaagaa
caattaatgactttggataaaatcaaagaaaaatcagcaaacaacatttacactgccatt
caagggagtaaagaaaactctgtcgaacgtttgatttttggcttaggaattcgccatgtg
ggggcgaaagcggcgaaaattttagcggagcattttggtgatttaccaaccttaagtcgt
gcaactgcggaagaaattgtggctttggattcaattggcgaaacaatcgcagacagcgtt
gtgacgtattttgaaaatgaggaagttcatgaattaatggctgaactggaaaaagcccaa
gtgaacttgacatataaaggtctccggacagaacaattagcagaagtggagtcacctttc
aaagacaaaacagttgttttaacaggaaaattaacgcagtacactcgcgaagaagccaaa
gaaaaaattgaaaatcttggtggaaaagttacagggagtgtttcgaaaaaaactgacatt
gtggttgctggcgaagatgcaggcagtaaattaaccaaagctgaaagcttaggcgtgagc
gtttggaatgaacaagaaatggtcgatgcgttagatgcaagtcatttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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