KEGG T05222: EFREU

Entomoplasma freundtii: EFREU_v1c00060

Entry

EFREU_v1c00060    CDS       T05222

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

efr Entomoplasma freundtii

Brite

KEGG Orthology (KO) [BR:efr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:efr03032]
    EFREU_v1c00060 (gyrB)
   03400 DNA repair and recombination proteins [BR:efr03400]
    EFREU_v1c00060 (gyrB)
Enzymes [BR:efr01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     EFREU_v1c00060 (gyrB)
DNA replication proteins [BR:efr03032]
Prokaryotic type
  DNA Topoisomerases
   EFREU_v1c00060 (gyrB)
DNA repair and recombination proteins [BR:efr03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EFREU_v1c00060 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C Toprim_4

Other DBs

NCBI-ProteinID:

ATZ16033

UniProt:

A0A2K8NTS8

Position

7583..9490

AA seq 635 aa
MSENYGSDSIKVLKGLEAVRKRPGMYIGSTSKAGLHHLVWEILDNSIDEAMAGYANRIVV
TITKDGEVVVEDNGRGIPVGVQHDTGRSALELVFTQLHAGGKFDSDSYKISGGLHGVGAS
VVNALSEYVDVLVKREGKVYHQVFSHGGTKQSALEVIDTTNETGTVVRFKPDPTIFQETV
IFDYITIKNKVKQLAYLNKGIEITLIDYRIDKTITYHFPNGILDYVREENANKQPINPNI
FYVDGKYDGVEVEVALQYNADYNDNLITFVNNINTHEGGTHEDGIRQALVRTINRYAEKV
AKNGAKSAQKFGWDDIKEGMIGILSIRHSDPSFEGQTKTKLSNLNAKKAVDNVVGDAFEE
FLMKSPLDAKAILDKNSTAQKARLAAQRAREETRRKGALDTFSLPGKLADCETKDPTIAE
LYLVEGDSAGGSAKTGRNRFFQAILPLRGKVLNVEKVQEARAFSNNEIKSIVTAVGCGIK
EDVNVCKLRYNKIVIMTDADVDGAHIRTLLLTFFYRYMKDLVRHGHIYIAQPPLYKIEAG
KKVAYAYSDQQLEDFKNGDYKNLRYTIQRYKGLGEMDPLQLWETTMNPEFRTMLQVTLED
AAIANEVFSNLMGEDPELRRDFIQENASFVENIDY

NT seq 1908 nt +upstreamnt +downstreamnt
atgtccgaaaattatggatcagattcgattaaggtattaaagggattagaagcggttcga
aaaagacccggaatgtatattggttcaacatctaaagcaggtttacaccatttagtgtga
gagattttagataattccattgatgaggccatggccggttatgctaatcgtatcgtagtt
acaatcaccaaagatggtgaagtggtagttgaagataatggtcgtggtattccggttgga
gtacaacacgatactggtcgctctgctttagaattagttttcactcaactccatgctgga
ggaaaatttgactctgattcttataaaatatctggtggtcttcatggtgtaggagcctcg
gttgtcaatgccctaagtgaatatgttgatgttcttgtaaaacgtgaaggaaaagtttac
caccaagtctttagtcatggtggaactaaacaaagtgccttagaagtgatcgatacaaca
aacgaaacaggaactgttgtacgctttaaacccgatccaactatttttcaagaaaccgtt
atttttgactacatcactatcaaaaacaaagtgaaacaattagcttatttaaataaaggt
attgaaatcacccttattgattatcgtattgataaaaccataacctaccactttcctaac
ggaatccttgattatgttcgtgaagaaaatgccaacaaacaaccaattaatcccaatatt
ttctatgttgatggaaaatatgacggtgttgaagtggaagtggctcttcaatataatgcc
gattataacgacaacttaatcacctttgttaataacattaatactcacgaagggggaact
catgaagatggaattcgtcaagccctagttcgaacaattaatcgttatgccgaaaaagtg
gccaaaaatggtgctaaaagtgcccaaaaatttggttgagatgatatcaaagaaggaatg
attggaattctatcaattcgtcatagcgatccctcttttgaaggccaaacaaaaacaaaa
ttaagtaatcttaatgccaaaaaagcagttgataatgttgtcggtgatgcttttgaagaa
tttttaatgaaatcacccttagatgcaaaagctatccttgataaaaatagtacggcgcaa
aaagctcgtttagctgcccaaagagcacgtgaagaaactcgtcgtaagggggctttggac
accttttcattgcctggtaaattagctgattgtgaaacaaaagatccaaccattgctgaa
ctttacttagtggaaggggattcggccgggggaagtgcgaaaacagggcgtaaccgtttc
ttccaagccattttacctttgcgaggaaaagttttaaacgttgaaaaagttcaagaagct
cgcgcttttagtaataacgaaattaaatcgattgttactgccgttggttgtggtatcaaa
gaagatgttaatgtttgcaaacttcgttataacaaaattgtaattatgactgatgccgat
gttgatggggcccatattcgtactttattactaaccttcttttatcgttacatgaaggat
ttagtgcgccatggacatatctatattgctcaaccaccactttacaaaatcgaagcgggt
aaaaaggtagcctacgcctattctgaccaacaactagaagattttaaaaatggtgattac
aaaaacttgcgttacacaattcaacgctataaagggttaggagaaatggatcccttgcaa
ctttgggaaacaacaatgaatcctgagtttagaaccatgctccaagtcactttagaagac
gccgctattgctaatgaagtcttttctaatttgatgggggaagatcctgaactacgtcgt
gatttcatccaagaaaacgcttcgtttgtcgaaaatatcgattattaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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