KEGG   Enterococcus faecium DO: HMPREF0351_11306
Entry
HMPREF0351_11306  CDS       T02120                                 
Symbol
recJ
Name
(GenBank) recombination protein J
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
efu  Enterococcus faecium DO
Pathway
efu03410  Base excision repair
efu03430  Mismatch repair
efu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:efu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HMPREF0351_11306 (recJ)
   03430 Mismatch repair
    HMPREF0351_11306 (recJ)
   03440 Homologous recombination
    HMPREF0351_11306 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:efu03400]
    HMPREF0351_11306 (recJ)
DNA repair and recombination proteins [BR:efu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HMPREF0351_11306 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HMPREF0351_11306 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HMPREF0351_11306 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AFK58930
UniProt: I3U1P2
Position
1291500..1293797
AA seq 765 aa
MRQANFDWKLSETEPSESFLQMIRELKLSPFVGKLLWQRGYHEEKDINRFLHPKEQELHD
PYLMHDMDKAISRIQEAVISGEKILVYGDYDADGITSATVMKETLELLGAEVEVFLPNRF
EHGYGPNQSVYQEKIEEGIQLIITVDNGVAGNDAVAYAQQAGVDVIITDHHELPENLPDA
YAIVHPRHPAGHYPFPDLAGVGVAFKVASALLEEPPVEFLDLVAIGTIADLVSLTDENRI
LVSLGIDAIHHSERIGLQALFEESGVKMRDADETTIGFSIAPRLNAIGRMGDPRPAVSLL
ATFDEEEASVQAKKLNEINEERKAIVEQITQEALAMVNKENHIHLLVNRGWHEGVLGIVA
GKIMNETGKPTLVLTLKEDGSAKGSGRSIEALNLFEMLDQMRDLFTYFGGHHAAVGLTMP
SENVTILQEKMNQYIVDHQIDLMRGPELRIDEVLLPNEVTVERIDELKLLAPFGTDNPLP
QFLFRQVQAENIKRIGANQQHLKFVLSDASSQLDAVAFGFGTQEEELLNNQVDVVGKLSI
NEWNGRKKPQLMVSDFSVGGLQVFDWRAKRFREQSRTSEGSLYLAFDSSTLKFVPEIIQE
AAIVFEGLDSVKAIIEKRKPNSLVIMDCPDDLADLKEVFRSYSFNRVYLMGISPDEAYLN
GVGTREQYAKLFKLIHSQERIDIRHKIKAIAQYLRIPEKLLIFMIQVFFELKFVTIENGV
LQKVASPESHPLTESRLYQRRLNKIKVEEFLLLSDIPTIKKWLTT
NT seq 2298 nt   +upstreamnt  +downstreamnt
gtgagacaagcaaattttgattggaagttaagcgagacagagccttctgaatcctttctc
caaatgatccgtgaactgaaattatctccatttgtcggtaagttactgtggcaaagaggt
taccatgaggaaaaggatatcaaccgatttttacatccaaaggaacaagaattacatgat
ccgtatctgatgcacgatatggataaagcaatcagccgaatccaagaagctgtaatcagt
ggagaaaaaatcctcgtttacggtgattatgacgcagatgggatcaccagtgcaacggta
atgaaagaaacactggaattacttggtgcagaagtagaagtattcctgccaaatcgattt
gagcatgggtatggaccaaaccaatctgtataccaagaaaagatcgaagaaggaatccag
ttgatcatcactgttgataacggggtagcaggaaatgatgcggtagcatacgctcagcaa
gctggtgtagacgtgatcattacagatcatcacgaactacctgagaatttaccagacgct
tatgcgattgttcaccctcgtcatccagcggggcactatccatttccagatttggcagga
gtcggagtagcattcaaagtagcttctgcattattggaagaaccgcctgtagaatttttg
gatttagtagcgataggaacgatcgccgatttagtttcattgactgatgagaatcgaatt
cttgtttcattaggaatcgatgccattcatcattcagaacggataggacttcaggcgcta
tttgaagaaagcggcgtaaaaatgagggacgcagacgaaacaacgatcggtttttcgatt
gctcccagactaaatgcaatcggtcggatgggcgatccacgtcctgccgtctcgttactt
gcgacgtttgatgaagaggaagcatccgttcaagcaaaaaaattgaatgagatcaatgaa
gaaagaaaagcaatcgtagagcagataacacaagaagcattagcgatggtcaataaggag
aatcatatccatctattggtaaaccgaggatggcatgaaggcgttttgggcattgttgct
gggaaaataatgaatgaaacgggtaaaccaacgcttgtccttactttaaaagaagatgga
tcagctaaaggatctggacgtagtattgaagccttgaatctttttgaaatgcttgaccag
atgcgagatttatttacttacttcggaggacatcatgcagcagtcggtttaacgatgcca
agtgaaaatgtcactatactacaggagaagatgaaccaatatatagtcgatcatcaaatt
gacttgatgagagggcctgagttgagaattgatgaagtattgctgccaaatgaagtaaca
gtagagcgaattgatgagctgaaactattggcgccatttggtacggataatcctttgcct
cagtttttatttcgacaagtccaagcagaaaatatcaaaagaatcggagcaaaccaacag
catctgaaatttgtcctttccgatgcatcgagtcagcttgatgcggtcgcttttggtttt
ggtactcaagaagaagaactgctgaataatcaggtagatgtggtaggaaagctttcgatc
aatgaatggaacgggcgtaagaaaccgcagctgatggtatctgatttttctgtgggtggt
ctgcaagtatttgattggcgggcaaaacgtttccgtgaacagagccgaacgtcggaaggt
agcctttatttagcatttgattcttctacgttgaaattcgtgcctgagattatccaggaa
gctgcgattgttttcgaaggactagattctgtaaaggcaataattgaaaaaagaaaaccg
aactctctagttattatggattgtccagatgatttagcggatctgaaagaagtttttcgg
tcttattcattcaatcgtgtttatctgatggggatttcgcctgatgaggcctatttgaat
ggggtaggcacaagagaacagtacgcaaaattgtttaaactgatccattctcaagaacga
attgatatacgtcataaaataaaagcaatagctcaatatttgcgtatccctgaaaaatta
ttaatttttatgatacaggtgttttttgaattgaaatttgttacaatagagaacggtgtt
ttacaaaaagtcgctagcccagaaagtcatcctttgactgagagcagattataccagcgg
cggctcaataaaatcaaagttgaggaatttttgcttttgagcgatattcctaccataaag
aaatggttaacaacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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