KEGG   Duffyella gerundensis: EM595_0025
Entry
EM595_0025        CDS       T04258                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ege  Duffyella gerundensis
Pathway
ege03030  DNA replication
ege03410  Base excision repair
ege03420  Nucleotide excision repair
ege03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ege00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EM595_0025 (polA)
   03410 Base excision repair
    EM595_0025 (polA)
   03420 Nucleotide excision repair
    EM595_0025 (polA)
   03440 Homologous recombination
    EM595_0025 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ege03032]
    EM595_0025 (polA)
   03400 DNA repair and recombination proteins [BR:ege03400]
    EM595_0025 (polA)
Enzymes [BR:ege01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EM595_0025 (polA)
DNA replication proteins [BR:ege03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EM595_0025 (polA)
DNA repair and recombination proteins [BR:ege03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EM595_0025 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EM595_0025 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH Sds3 HHH_5 HHH_2
Other DBs
NCBI-ProteinID: CUU22262
UniProt: A0A0U5L069
Position
1:27789..30569
AA seq 926 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSMLLQYKPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLAVSGVEADDVIGT
LALQADKAGRSVLISTGDKDMAQLVTPNITLINTMSNSILGPEEVNDKYGVPPELIIDYL
ALMGDASDNIPGVPGVGEKTAQALLQGLGKMTALYENLDKVAALGFRGSKTMAAKLEQNK
ELAFLSYQLATIKTDVPLDLSYEQLNVAEPEVDSLLALFRHYEFKRWCSDLEEGKWLQGK
RGGGFTASASAVEAAPVVEATSVLSADGYVTILDEETFDQWLKKIAACDVFAFDLETDSL
DTLTATIVGISVAVAPGEAAYLPVAHDYIDAPPQLDRDWVLSRLKPILEDSSASKVGQNL
KYDRGVLKNYDIELQGIKFDTMLESYLLNSVVGKHDMDTLSARWLNHKTVTFVEIAGKGK
NQLTFNQIALEQAAHYAAEDADVTLQLHLKMWPELEKQTGPLRVFNEIEMPLVPVISRIE
RNGVLIDQHILARHSQELTLRLDELEKQAHELAGEPFNLSSTKQLQTILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPQMMNPFTGRVHTSYHQ
AVTATGRLSSTEPNLQNIPVRNDEGRRIRQAFIASPGCRIVAADYSQIELRIMAHLSQDK
GLLQAFAEGEDIHRATAAEVFGSPLDKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEARKYMDLYFERYPGVLQYMENTRKFAAEKGYVETLDGRRLYLPDIKSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIEVDRWLQQQPDVKMIMQVHDELVFEVKESLLDEACEKIRQ
LMESSMQLDVPLQVEVGIGDNWDEAH
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggctcaaatagcagaaaacccactgattctggtcgatggatcatcttatctttatcgt
gcttatcacgcttttcccccgctgactaacagcgcaggcgaaccaacgggtgcgatgtat
ggcgtcctgaatatgctgcgcagcatgctgctgcaatataagccgagccacgttgcagtg
gtttttgatgccaaaggaaaaacgtttcgcgatgagctgttcgagcattacaaatcgcat
cgtccacccatgccggacgatctgcgtgcgcaaatcgaacctttgcatcagatggtaaaa
gcgatgggcctgccgttgttggccgtttccggtgtcgaagctgatgacgtcatcggtacg
ctggccttgcaggcagataaagcgggtcgatcggtgctgatcagcaccggtgacaaagat
atggcgcagttagttacgccgaacatcacgctaattaataccatgagcaacagcattctt
ggcccggaagaggtcaatgacaaatatggcgtgccgccagagttgatcatcgattacctc
gcactgatgggcgatgcctccgataacattccgggcgtgccgggtgtcggtgagaaaacc
gcgcaggcgttgctgcagggattaggcaaaatgactgcgctctatgagaatctggataag
gtggccgcacttggcttccgcggttccaaaaccatggcggccaagcttgaacagaataaa
gagctcgcgtttctttcttatcaattggccaccattaaaaccgatgtgccgctggatctg
agttacgagcagctgaacgtagctgagccggaagtcgattcactgcttgcgctgttccgt
cattatgagttcaaacggtggtgcagcgatcttgaagaagggaaatggctgcagggtaaa
cgaggcggcggttttactgcgtctgcttccgctgtcgaagccgcgcccgtcgttgaggcg
accagcgtgctctctgctgacggttacgtcaccattcttgatgaagaaaccttcgatcaa
tggctgaaaaaaatcgcagcctgcgacgtatttgctttcgatctggaaacggattcgctg
gacacgctgaccgctactattgttggcatcagcgtagccgttgcgccgggcgaagcagcc
tatttgccggttgctcatgattatattgatgcgccaccgcagctcgatcgcgactgggtg
ctgtcgcgcctgaagccaatccttgaagacagctctgccagtaaagtcgggcaaaatctc
aaatacgatcgtggcgtgctgaaaaattacgatatcgaattacagggcattaaattcgat
accatgctcgaatcctacttgctgaacagcgttgtgggcaaacatgacatggatacgctc
tcagcacgctggctaaaccacaaaaccgttaccttcgtagagattgccggtaagggcaaa
aaccagcttacctttaaccagatagcgctggagcaggctgcgcattatgccgcagaagat
gccgacgtcacgctgcagctgcatctgaaaatgtggccggaactggaaaagcagactgga
ccgttacgcgttttcaatgagattgaaatgccgctggtcccggtgatttcgcgtattgag
cgaaacggcgtgctgatcgatcagcatattctggccagacattcgcaggagctaacgctg
cgccttgatgagctggagaaacaggcgcacgagctggctggcgagccgtttaatctctct
tctactaagcagctgcaaactattctgtttgagaagcagggcattaagccaactaaaaaa
acgccgggcggggcaccatcaaccagcgaagaggtgctcgctgagctggcacttgattat
ccgctgcctaaagtgatccttgaacatcgcggcttatcgaagctgaagtcgacctatacc
gacaaactgccgcagatgatgaatccgtttaccggacgcgtacatacctcttatcaccag
gcggtaacggcgaccggcaggctctcttcaaccgagccaaacctgcaaaatattccggtg
cgtaacgatgaagggcgtcgcattcgccaggcatttatcgcttcgccaggctgtcgcatt
gtggcagctgactattcgcaaattgagctgcgcattatggcgcacctgtcgcaggacaaa
ggtctgctacaggcgtttgctgaaggcgaagatattcaccgtgctaccgcggctgaagta
tttggcagcccgctggacaaggtcagtggtgagcagcgtcgcagcgccaaagcgatcaac
tttggcctgatttacggcatgagcgcttttggtctttctcgtcagctcaatatcggtgcc
ggcgaggcgcggaaatatatggacctttacttcgagcgttatcctggcgtgttgcagtat
atggaaaatacgcgcaaattcgccgcagaaaaagggtatgtggagacactggatggccgt
cgtctgtatctgccggacatcaaatccagcaatgcgattcgtcgcaaagccgccgagcgt
gcagcgatcaatgcgccaatgcagggtaccgcagcagacattatcaaacgcgccatgatc
gaagttgatcggtggctccagcagcagccggatgtgaaaatgatcatgcaggttcacgat
gagctggtgtttgaagtgaaagagtccctgctggatgaagcctgtgagaaaattcgccag
ctgatggaaagcagcatgcagcttgatgtgccattgcaggtagaagtgggcattggtgat
aactgggatgaagcgcactga

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