KEGG   Duffyella gerundensis: EM595_0818
Entry
EM595_0818        CDS       T04258                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ege  Duffyella gerundensis
Pathway
ege03030  DNA replication
ege03430  Mismatch repair
ege03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ege00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EM595_0818 (dnaE)
   03430 Mismatch repair
    EM595_0818 (dnaE)
   03440 Homologous recombination
    EM595_0818 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ege03032]
    EM595_0818 (dnaE)
   03400 DNA repair and recombination proteins [BR:ege03400]
    EM595_0818 (dnaE)
Enzymes [BR:ege01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EM595_0818 (dnaE)
DNA replication proteins [BR:ege03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EM595_0818 (dnaE)
DNA repair and recombination proteins [BR:ege03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EM595_0818 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: CUU23054
UniProt: A0A0U5KYJ1
Position
1:917464..920946
AA seq 1160 aa
MAEPRFIHLHVHSDYSMVDGLAKTGPLVKKAAALGMPAIAITDYTNLCGLVKFYGTAHGA
GIKPIIGADFQVASELMGDELTYLTVLASNNDGYQNLTQLISRAYLRGYGIAGPIIDRDW
LIELGEGLILLSGGRRGDVGRSLLRGNQALVSQCLAFYQTHFPDRYYLELVRTGRQDEES
YLHAAVELAIAESVPVVATNEVCFLTEDEFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCALFADIPEALENSVEIARRCNVTVRLGEYFLPQFPTGEMTTEDFLVKKSREGL
EERLEFLFPDEAVRLEKRPAYDERLEIELTVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDIDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFVAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFSPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDITAIPLEDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFQDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDEGEIVYGIGAIKG
VGEGPIEAILEARNQDGYFKELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALPDALKAADQHAKAEAIGQSDMFGVLAEEPEQVEKSYASVTRWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKEMHPTERGKIITAAGLVVSARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQHLLEKDRILLVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atggccgaaccacgttttattcacctgcacgtacacagtgattattcgatggtcgatgga
ctggccaaaaccgggccgctggtaaaaaaagcggcagcacttggcatgcctgccattgcc
attaccgattacaccaacctctgtggtctggtgaagttctacggtacggcacacggtgct
ggcatcaagccgattatcggcgccgatttccaggtcgccagcgagctgatgggcgacgag
ctcacctatctcaccgtgctggcctccaataacgacggctatcaaaacctgacccaactc
atttcgcgcgcctatttgcgtggctacggcatcgccggtccgatcatcgatcgtgactgg
ctgattgagctgggtgaaggattgatactgctttccggtggccgacgcggcgatgtcggc
cgcagtttattacgtggtaatcaggcgctggtgtcacaatgcctggccttttatcagaca
cattttcccgatcgttattacctcgaactggtgcgcaccgggcgtcaggatgaagagagc
tatctgcatgccgccgttgaactggccattgccgaatcggtgccggtagtagccaccaat
gaagtctgcttcctgaccgaagatgagtttgacgcgcacgaaatccgcgtggcgattcat
gatggttttaccctcgacgatcctaagcgcccacgtaactacagtccgcagcaatatatg
cgcagcgaagaagagatgtgcgccctgtttgctgacatcccggaagcgctggagaacagc
gtagaaattgcgcgtcgctgcaacgtcaccgtgcgccttggcgaatacttcctgccgcag
tttcctaccggcgagatgaccaccgaagattttctggtaaaaaaatcccgtgaagggctg
gaagagcgtctggaattcctgtttccggatgaggcggtgcgtctggaaaaacgcccggct
tacgatgaacgtctggagattgaactgacggtgatcaaccagatgggattcccgggctac
tttttgatcgtgatggagtttatccagtggtcaaaagacaacggtattccggtcggtccc
ggccgtggctctggtgctggctccctggtcgcctatgcgctgaaaatcaccgatatcgat
ccactggcctttgatctgctgtttgaacgcttcctgaatccggaacgtgtttccatgcct
gactttgacgtcgatttctgtatggaaaaacgcgatcaggtgattgatcacgtggccgaa
atgtatggccgcgaggcggtatcgcaaattatcacctttggtaccatggcggcgaaggcg
gttattcgtgacgtgggccgcgtgctgggccatccctatggctttgttgatcgcatctcc
aaactgattccgcccgatcccggcatgacgctggaaaaagcctttgtcgctgagccgcag
ttgccggagatttacgaggcggatgaagaggttaaagcgctgattgatatggcgcgtaag
ctggaaggcgttacgcgtaatgccggtaaacatgctggtggcgtggtcattgccccaacc
aaaatcaccgatttttccccgctctattgcgatgaaaatggccagttcccggtaacgcag
tttgataagaacgacgtcgaatatgccgggctggtgaaattcgactttttaggcctgcgc
accttaaccatcatcgactgggcgctgaagatgatcaatccgcgccgggcgaagcagggc
cttgagccgattgatattactgcgatcccgcttgaggataaaaaaagcttcgacatgctg
cagcgcgcggaaaccacggcggtattccagctcgaatcacgcggtatgaaagatctgatc
aagcgcctgaagccggactgctttgaagatatgatcgcgctggtggcgctgttccgtccg
gggccgctgcaatccggcatggtggataactttattgaccgtaaacacggccgtgaagcg
atctcctatcctgacattcagtggcagcacgagtcactgaaaccggtgctggaaccgacc
tacggcattattctgtatcaggaacaggtgatgcagattgcgcaggtgctttcaggctac
acactgggcggtgcggatatgctgcgtcgcgcaatgggtaaaaagaagccggaagagatg
gccaagcagcgctcggtgtttcaggatggcgccgaaagcatgggcatcgacggcgaactg
tcgatgaaaatcttcgatctggtagagaaatttgccggttacggctttaacaaatcgcac
tcggctgcctacgcgctggtctcctatcaaacgttgtggctgaaagcgcactatccggcg
gaattcatggcggcggtgatgaccgcggatatggacaataccgagaaggtggttggcctg
gtggatgagtgctggcgtatgggcctcaaggtgctgccgccggatatcaactccggtctg
tatcaatttcacgttaatgatgaaggcgagatcgtttacggcatcggcgcaatcaaaggc
gtgggtgaaggcccgatcgaggcgatccttgaagcacgtaaccaggatggctattttaaa
gagctgtttgatctctgcgcgcgcaccgataccaaaaagatcaatcggcgggtgatggaa
aaactgatcatgtccggcgcttttgatcgccttggcccacaccgggcggcgttgatgagt
gcgctgcccgatgcgctgaaagccgcggatcagcatgccaaagcggaagccatcggccag
tcagacatgttcggcgtgctggcggaagagccggagcaggtggagaaatcctatgccagc
gtgacccgttggccagagcaggttcagctggatggtgaacgcgaaacgttaggattgtat
ctaaccgggcatccgattaatcagtaccttaaagagatcgagcgttatgttggcggcgtg
cgcctgaaagagatgcacccaacggaacgtggtaagatcattaccgcagccggattagtg
gtgtcggcgcgtgtgatggtaaccaaacgcggtaaccgtatcggcatctgtacgcttgac
gatcgatccggtcgtcttgaggtcatgttatttaccgatgccctcgataagtatcagcat
ttgctggaaaaagaccgtatcctgctcgtcagcggacaggtcagcttcgatgatttcagc
ggcgggcttaaaatgaccgcacgcgaagtgatggacattgacgaagcacgcgaaaagtat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtccctggagccccatcgttcgggaaccattccggtgcatctctactatcag
agagaggacgcgcgggcgaagctgcgctttggtgcagcgtggcgtatttcgcccagcgat
cgtttgctcaacgatctgcgatcgttgatcggttcggagcaggtggaactggagtttgac
taa

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