KEGG   Duffyella gerundensis: EM595_1999
Entry
EM595_1999        CDS       T04258                                 
Symbol
xthA
Name
(GenBank) exonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
ege  Duffyella gerundensis
Pathway
ege03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ege00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EM595_1999 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ege03400]
    EM595_1999 (xthA)
Enzymes [BR:ege01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EM595_1999 (xthA)
DNA repair and recombination proteins [BR:ege03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EM595_1999 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3
Other DBs
NCBI-ProteinID: CUU24233
UniProt: A0A0U5L0K5
Position
1:2127404..2128219
AA seq 271 aa
MATEMKFVSFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFY
HGQKGHYGVALLTKTAPTEVRYGFPGDEEDAQRRLIMADIPSPLGDITVINGYFPQGESR
DHPTKFPAKARFYRDLQDYLQAQPMDKPILVMGDMNISATDLDIGIGEESRKRWLRTGKC
SFLPEEREWMDRLLGWGLVDTWRLQHPEDNEQFSWFDYRSKGFDDNRGLRIDLLLASQPL
AERLAETGIDYQIRAMEKPSDHAPVWASFTL
NT seq 816 nt   +upstreamnt  +downstreamnt
atggcaactgaaatgaaatttgtttcttttaacatcaatgggctgcgcgcgcgtcctcat
caactggccgcgttggttgaacagcaccagcctgacgtcatcggcctgcaggaaacaaaa
gtccatgacgatatgtttccgcttgaagaggtcagtaagctgggctatcacgttttttat
cacggccagaaaggccattatggcgtggcgctgctgactaaaaccgcccccaccgaggtg
cgttatggttttcccggcgatgaagaagacgcgcagcgtcggctgatcatggccgacatc
ccgagcccgctgggcgacatcacggtgattaacggctatttcccccaaggcgaaagccgc
gaccatcccaccaagtttcccgccaaggcgcgcttttatcgcgatttacaggattatctg
caggcgcagccaatggataagcccatcctggtgatgggtgatatgaacatcagcgcaacc
gatctggatattggcattggtgaagagagccgcaaacgctggctgcgaaccggcaaatgt
tcatttttaccggaagagcgtgaatggatggatcggctgctgggctgggggctggtcgat
acctggcgcctgcagcatcctgaagataacgagcagttctcgtggtttgactaccgttcc
aaagggtttgatgacaatcgcggattgcgcatcgacctgctgctggccagccagccactg
gcggaacgccttgctgaaaccggcatcgattatcagatccgtgcgatggagaagccctcc
gatcatgcgccggtctgggccagctttacgctgtaa

DBGET integrated database retrieval system