KEGG   Aurantiacibacter gangjinensis: BMF35_a1692
Entry
BMF35_a1692       CDS       T04581                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
egn  Aurantiacibacter gangjinensis
Pathway
egn03030  DNA replication
egn03410  Base excision repair
egn03420  Nucleotide excision repair
egn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:egn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BMF35_a1692
   03410 Base excision repair
    BMF35_a1692
   03420 Nucleotide excision repair
    BMF35_a1692
   03430 Mismatch repair
    BMF35_a1692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egn03032]
    BMF35_a1692
   03400 DNA repair and recombination proteins [BR:egn03400]
    BMF35_a1692
Enzymes [BR:egn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BMF35_a1692
DNA replication proteins [BR:egn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BMF35_a1692
DNA repair and recombination proteins [BR:egn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BMF35_a1692
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BMF35_a1692
   MMR (mismatch excision repair)
    DNA ligase
     BMF35_a1692
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BMF35_a1692
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT SnoaL_3
Other DBs
NCBI-ProteinID: APE28521
UniProt: A0A0G9MQ83
Position
I:1733129..1735183
AA seq 684 aa
MMNDAQAANELMRLARQIAKHNKLYHAEDAPEISDAEYDALVRRNAELEAQFPHLVRADS
PSQAVGHEIAASPLSKVEHEVRMLSLDNAFADEEVADFAARVRRFLSLDESETVAFTAED
KIDGLSCSLRYEKGELVLAATRGDGSVGETVTANVAHVEGIPQALKGDVPDVFEIRGEVY
MSRADFAALNAAQEEAGGKLFANPRNAAAGSLRQKDASVTAERPLKFWAHGWGATSDVPG
ETQQDVVRAIESWGVPVSPLFTRVESVEAMLAHYATIAAARPDLPYEIDGVVYKVDRLDW
QKRLGFVAKAPRWALAHKFPAERAETTVEAIDIQVGRTGKLTPVGRLAPVLVGGVTVTNV
TLHNRDEIARLGVRPGDRVVIQRAGDVIPQVVENLTRDADRPAFDFPDHCPVCDSEAVAE
EGEVDVRCTGGLICRAQQFERLKHFVSRGALDIDGLGEKTIAEFIEHGWLDSGPADIFRL
KNREAEILALDGWKEKSARNLLASIEAKRQPDAARLLFGLGIRHVGAVTARDLLKHFHAL
PALRAAAEAARAGDEDAAQSLTAIDGIGSAVVEALGDFFHEEHNRALWDDLLSEVSPPRY
EVESVDSPVAGKVVVFTGKLETMSRDEAKAQAERLGAKASGSVSAKTDLLVAGPGAGSKL
KKAEELGIEVMDEAGWAAIVEAAG
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgatgaatgatgcccaagccgccaacgagttgatgcgtctcgcgcggcagatcgcgaag
cataacaagctctaccacgccgaggacgcgcccgagatctcggatgcggaatatgatgcg
ctggtgcggcgcaatgccgagctggaggcgcagtttccacatctcgtccgcgcggattcg
ccgtcgcaggcagtggggcatgagatcgccgcttcgccgctctccaaggtcgagcatgaa
gtgcggatgctcagcctcgacaatgcttttgccgacgaagaggtggccgattttgcggcg
cgggtgcggcggttcctgtcgctggacgaaagcgagacggtcgctttcaccgctgaggat
aagatcgacgggctatcctgctcgctgcgctacgagaagggcgaactggtgctggccgcc
acgcgcggggatggctcggtcggcgagactgtcaccgccaatgtcgcgcatgtcgaaggc
attccgcaggcgctgaaaggcgatgtgcccgacgtgttcgagatacgcggcgaggtctat
atgagccgcgccgatttcgcagcgctcaatgcagcgcaggaggaagcgggcggcaagctg
ttcgccaatccgcgcaatgcggcggcgggttctttgcgacagaaggatgcgagcgtcacg
gcggagcgcccgctcaaattctgggcgcatggctggggcgctacgagcgatgtgccgggc
gaaacgcagcaggatgtggtgcgcgccatcgaaagctggggcgtgccggtcagcccgctt
ttcacccgcgtcgaaagcgtagaggccatgctggcgcattacgcgacgatcgccgccgcg
cggcccgaccttccctatgaaatcgacggcgtggtctacaaggtggaccggctcgactgg
cagaagcggctgggctttgtcgccaaggcaccgcgctgggcgctggcgcacaagtttccc
gccgagcgcgccgaaaccacggtggaggccatcgacatacaggtgggccgcaccggcaag
ttgacgcctgtcgggcggctcgcgccggtgctggtgggcggggtgactgtcaccaatgtc
acgctgcacaatcgcgacgagatcgcgcggcttggcgtgcgtccgggcgatcgggtggtt
atccagcgcgctggcgatgtcatcccgcaggtcgtcgagaacctgacccgcgatgcggac
cgccctgccttcgactttcccgatcattgcccggtctgcgacagcgaggctgtggccgag
gaaggcgaagtcgatgtgcgctgcaccggcggcctgatctgccgcgcgcagcaattcgag
cggttgaagcacttcgtcagccgcggcgcgctcgatatcgatgggctgggcgaaaagact
attgccgagtttatcgagcatggctggctggacagcgggcctgcggacatttttcgcctg
aagaatcgcgaggcggagatccttgcgctcgacgggtggaaagagaaatcggcccggaac
ctgctcgccagcatcgaagccaagcgccagcccgatgcggcgcggctgctattcggtctc
ggtatccgccatgtcggcgcggtgacggcgcgcgatctgctgaagcatttccacgcgctt
cccgccttgcgggctgctgccgaagccgcgcgggcaggggacgaggatgccgcgcaatcg
ctgaccgccatcgacggtatcggcagcgcggtggtcgaagcgcttggtgatttcttccac
gaagagcacaatcgcgccctctgggacgatttgctcagcgaagtttcgcccccgcgttac
gaggtggaaagcgtcgacagcccggtggcgggcaaggtcgtcgtctttaccggcaagctg
gagacgatgagccgcgacgaggcgaaggcgcaggccgagcggctgggcgcgaaagccagc
ggctccgtgagcgcgaagacagacttgctggtggcaggcccgggcgctggatcgaagctg
aaaaaggccgaggaactgggcatcgaagtgatggatgaagcgggctgggcggccattgtg
gaggcagccggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system