KEGG   Eucalyptus grandis (rose gum): 104423071
Entry
104423071         CDS       T03547                                 
Name
(RefSeq) nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104423071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104423071
Enzymes [BR:egr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     104423071
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     104423071
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Nrap_D2
Other DBs
NCBI-GeneID: 104423071
NCBI-ProteinID: XP_010033831
Position
2:complement(34111617..34118291)
AA seq 748 aa
MVSSEGLGASPPPAMATTATAAKQFGVTKPISVLGPTEVDVQRSMELEKFLVDAGLYESE
EEALKRQMVLDRIGQIVKDWVKQLTRLRGYSDQMVEDANAVIFTFGSYRLGVHGPGADID
TLCVGPSYVNREEDFFFILHDILAQMEEVTELQPVPNAHVPVMKFKFDGISIDLLYASIS
LLVVPDDFDISQVSVLYDVDEPTVRSLNGCRVADQILKLVPNAENFRTTLRCLKLWAKRR
GVYSNVTGFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWHWPNPVMLCPIEEDE
LGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICEEIELN
KAQWNALFEPYMFFESYKNYLQVDVIADDADDLRSWKGWVESRLRQLTLMIERDTYGKLQ
CHPYPHEYVDTSKQCAHTAFFMGLQRKQGEKVQEGQQFDIRGTVDEFRHSVNMYMFWKPG
MEIYVSHVRRRQIPSYVFPDGYKRARSRISTQHQGEKASSEDADVCKGESAERDLKKKKS
LVGENVNQSGLKKRRSLSPYTCGSVSPEIVTDKPRNLSQENSILGLVGKGETSELNMTSQ
VGKSCDFQSINFSANTGSINQELKVAEVDERSKLENAEGGCASNFSAVRVLASEVGSCEG
MRLDSTFGSSEGNNGSAEVSIDGSTNLGSSRSDSCEADSNSPLEVGCPEFAGGLREELEP
NAVVGLALQPRGGMDPEVQKPVISSMAG
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggtgagctcggagggtttgggggcatcgccgccgccggcgatggcgacgacggcgacg
gccgcgaagcaattcggggtcacgaaaccgatatcggtgttggggcccaccgaggtcgat
gttcagagaagcatggagttggagaagtttttggtcgatgctgggctctatgagagcgaa
gaggaggctctgaagagacagatggttctcgatcggattgggcagattgtaaaagattgg
gtgaagcaactaactcgtctacgcgggtactcggatcaaatggtggaggatgcaaatgct
gttatttttacttttggttcttataggcttggggtacatggccctggtgctgacatagac
actttgtgtgttgggccatcctatgtgaatcgagaggaggatttcttcttcatattgcat
gacatcctggcacagatggaagaagtgacggaattacagccagttcccaatgctcatgtg
cctgtaatgaaatttaagtttgatgggatatcaatcgaccttctttatgcaagcatttcg
ctactggttgtgccagatgattttgacatctcccaagtatctgttctgtatgatgttgat
gaacctactgttcgaagtctcaatgggtgcagggttgcagatcaaattctgaagcttgtt
ccgaatgctgagaattttcggactacactccgctgtctaaagctttgggctaaaaggcgt
ggcgtctattccaatgtgactggatttcttggtggtgtcaactgggcattgcttgtagct
cgtgtgtgccagctttatcctaatgcggtccccagtatgctagtttcacggttcttcaga
gtttatacacagtggcattggccaaacccagttatgttatgcccaattgaagaggatgaa
cttggcttttctgtttgggatccacgtaaaaatcctcgtgacaggacccatcatatgcct
atcataacacctgcatatccttgtatgaattctagttataatgtctcaaccagtactctg
cgtgttatgatggaacagttccaatttggcaacaagatatgtgaggagatagaattgaac
aaggcccagtggaacgcactatttgagccttatatgttcttcgaaagctataaaaattat
ttgcaggtcgacgtaattgctgacgatgcagatgacttgcgttcttggaaaggctgggtg
gaatcgaggcttaggcagttgactttgatgattgaacgggacacatatgggaagttgcaa
tgccatccataccctcacgagtatgttgatacatcaaagcaatgtgcacatacggctttt
ttcatgggtttgcagaggaaacagggggagaaagttcaggaaggtcagcagtttgacata
cgtgggacggttgatgaatttaggcactccgtaaatatgtatatgttctggaaaccgggg
atggagatatatgtgtctcatgttcgcagaagacagattccttcttatgtgtttcctgat
ggatataagcgagctcgatctagaatttcaacccagcatcaaggtgaaaaagcttcctca
gaagatgctgatgtgtgcaagggtgaatcagctgagagagaccttaaaaagaagaaaagc
cttgtaggggagaatgtgaatcaaagtggtttgaagaaacgcagatctctcagtccatac
acatgtggttcagtatcacctgaaattgttactgacaaaccccgcaacctgtctcaggag
aattctatattaggtttagtgggaaagggagagacttctgagttgaacatgacatcgcag
gttggcaaaagttgcgactttcagtctattaactttagtgctaatactgggtccatcaac
caagagctgaaagtagctgaggttgatgaacggtcaaagttagaaaatgccgaaggtggc
tgtgcttctaatttcagtgctgttagagtgcttgccagtgaggtgggttcatgtgaggga
atgcggcttgactctaccttcggaagcagtgaggggaataatgggagtgctgaggttagc
attgatggtagtaccaatctggggtcttctcggagtgattcatgtgaggcagattcgaac
tcacctttggaggttggatgtcctgagttcgcaggaggcttgcgagaagaattggagcca
aatgcggtggttgggctggcacttcagccgaggggcggcatggacccagaggtgcaaaag
ccagtgataagctcgatggcaggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system