KEGG   Eucalyptus grandis (rose gum): 104425547
Entry
104425547         CDS       T03547                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104425547
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:egr01002]
    104425547
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egr04121]
    104425547
Enzymes [BR:egr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104425547
Peptidases and inhibitors [BR:egr01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104425547
Ubiquitin system [BR:egr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104425547
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 MATH UCH_1 Ubiquitin_2 GNAT_acetyltran GMP_PDE_delta
Other DBs
NCBI-GeneID: 104425547
NCBI-ProteinID: XP_010036565
UniProt: A0A059A3B4
Position
11:25577105..25593551
AA seq 1117 aa
MTMMTPPPLDQEEEEMLVPHSDLVVEGPQPMEGVAQVDPAGAVETQQLEEPPSMKFTWRI
DNFPRLNVRKHYSEVFVVGGYKWRILIFPKGNNVEHLSMYLDVADSPALPYGWSRYAQFS
LAVVNQSNNKYTIRKDTQHQFNVRESDWGFTSFMPLGELYDPVRGYMVNDTVFVEAEVVV
RKILDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYHDSSVTTKELTRSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECIDVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYQAEEHGLQDAKKGVLFIDFPPVLQLHLKRFEYDFIRDTMVKINDRYEFPLQLDLDR
DNGKYLSPDADRSVRNLYSLHSVLVHSGGVHGGHYYAFIRPTLSDLWFKFDDERVTKEDI
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICHVDEKDIAEH
LRVRLKKEQEEKEEKRKHKAQAHLYTIIKVAREEDLVEQIGKDIYFDLVDHDKVRSFRIQ
KQIKFKDFKEEVARDFGVPVQCQRFWLWAKRQNHTYRPNRPLAPPEEEQPVGQLREMMNK
TNNAELKLFLEVELGLDKVPVSPPEKSKDDILLFFKLYNPEKGELRYVGRLFVKFYGRPI
EILPRLIEMAGFNQDEELELFEEIKFVPGVMCEHLDKKISFRASQLEDGDIICFQKARMD
NEDEFRYPDVPSYLEYVHNRQIVHFRSLERPKEDDFVLELSKVHNYDEVVERVAQQVGLD
DPSKIRLTSHNCYSQQPKPQPMKFQGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
NLKVAFHHASKDEVVIHHIRLPKQSTVGDVINELKTKVDLSRPDAELRLLEVFYHKIYKI
FPSSEKIENINDQYWTLRAEEIPEEEKDLGPHDRLIHVYHFMKETAQSQLQVQNFGEPFL
LLIHEGETLAEVKMRIQKKLQVPDDAFSKWKFAFLSLGRPEYLEDSEILSNRFQMFQQRR
DVYGEQYLGLEHSDAPKRSYVVNQNRHTHEKPVKIYN
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgactatgatgactcctccgccgttggatcaagaggaggaagaaatgctggtcccgcac
tccgatttggtcgtcgaggggcctcagcccatggaaggcgtggcgcaggtggatcctgct
ggcgcggtggagactcagcaactggaggagcctccttcgatgaagttcacttggagaatc
gacaacttccctaggttgaatgtgaggaagcattattccgaggtttttgttgtggggggt
tacaaatggaggatacttattttcccaaaaggaaacaatgtggaacacttatctatgtat
ttagatgtagcagattcaccagcacttccgtatggatggagcagatatgcccagttcagt
ttggctgtggtgaatcagagcaataacaagtatacaataagaaaggatacacaacatcag
ttcaatgtgagagagagtgactggggttttacatccttcatgcctcttggcgagctatat
gatcctgttagaggatatatggtaaatgatacagttttcgtggaagctgaggttgttgtg
cgcaagattctggattactggtcatacgactcaaaaaaggagactggttatgtgggactt
aagaaccaaggagccacctgttatatgaactctttattgcagactttgtaccatattccg
tactttagaaaggctgtataccatatgccaacaactgagaatgacatgccttctggaagc
attcctttggctcttcagagtttgttctataagctgcaatatcatgatagcagtgtcacg
acaaaagaactgacaagatcatttggatgggatacttatgattcatttatgcaacatgat
gttcaagaactgaatagagtcttgtctgaaaagcttgaggataaaatgaagggaactgtg
gtagagggcacgatacagcaattatttgagggtcatcatatgaattatattgagtgcatc
gatgtagactataaatcaaccagaaaggaatcgttttacgatctacagcttgatgttaaa
gggtgtcgtgatgtttatgcttcgtttgacaaatatgttgaagttgaacgtcttgaaggt
gacaacaaataccaagctgaggaacatggtttgcaggatgcaaagaagggcgtcctgttt
attgacttccccccagttctgcaacttcaccttaagcggtttgaatatgattttatccga
gacactatggttaagataaatgatcgctatgagttccctcttcagctggacttagacaga
gacaatggaaaatatttgtcaccagatgcagataggagtgtacgcaacctttattctctt
cacagtgtcttggttcatagtggtggtgttcatggtggccattattatgcctttatcagg
cccacactctctgatctatggtttaaatttgatgatgaacgggtgacaaaagaagatata
aagagggctttggaagaacagtatgggggagaggaggagttgccgcagaccaatcctggt
tttaacaacactccctttaaatttacaaaatactcaaatgcatacatgctcgtgtatata
cgtgacagtgacaaggataaaataatttgtcacgtcgatgagaaggacattgcagaacat
ttgagggtgaggttgaagaaggaacaagaagagaaggaggaaaagagaaagcacaaggca
caagcccatctttatactataataaaggtagcacgagaagaggatcttgttgagcagatt
ggaaaagatatatacttcgatcttgtggaccatgacaaagtccgaagttttcgcattcag
aagcaaattaagtttaaagattttaaggaggaagttgccagagactttggtgtgcctgtg
caatgtcagcgtttctggttatgggcaaagaggcaaaaccatacttaccgtccaaatcgg
cctctggcacccccagaggaagaacaaccagttggacagttaagggagatgatgaacaag
accaacaatgcagaattaaagctgttcttggaagttgagcttgggctggataaggttcct
gtttcaccacccgaaaaatctaaagatgatatcttgctattcttcaaactttacaaccct
gagaaaggagaactgcgatatgtaggtaggctctttgtgaagttttatggtagaccaatt
gaaattttgccaagattgattgagatggccggcttcaatcaagatgaggaattagaacta
tttgaggagataaagtttgtgcctggtgtcatgtgtgagcatcttgacaagaagatatca
tttcgagcgagtcagcttgaagatggggacatcatttgctttcaaaaagctcgaatggac
aatgaagatgaatttcgttatcctgatgttccttcttacttggagtatgtgcataaccgc
cagattgttcattttcgatcattggaaagaccaaaggaggatgatttcgtcctagagttg
tcaaaagtacataattatgatgaagtggtcgaaagagtggctcaacaagttgggctggat
gatccatcaaaaattaggcttacatctcacaattgctactcgcaacagcctaagcctcaa
ccaatgaagtttcaaggggtagagcatctttcagatatgctagtccattataaccagacc
tctgatatattgtactacgaagtactggacatccctctcccagagttgcaaggtctaaag
aacttgaaagttgcgtttcatcatgcctcaaaggatgaggttgtaattcatcatattaga
cttccaaagcagagcacagttggtgatgttattaatgaacttaagacaaaggtagatttg
tctcgtccagatgcagaacttagacttcttgaagtcttctatcataagatctataagatc
tttccttccagtgagaaaattgagaatataaatgaccaatactggacattgcgcgctgag
gagattcctgaagaagagaaggaccttgggccacatgatcgcttgattcatgtttaccac
ttcatgaaggaaactgctcaaagtcagctgcaagtgcagaactttggggaaccctttttg
ctgctcatccatgaaggtgaaactttagctgaagtgaaaatgcgcatacaaaagaaactg
caagttccagatgatgcattctccaagtggaagtttgcatttctttcgttgggtcgccca
gagtatcttgaggattctgaaattttatcaaaccgttttcagatgtttcaacagagaaga
gatgtttatggggaacagtatcttggattggagcactctgatgctcccaagaggtcttat
gtggtgaatcagaaccgtcacactcatgagaagcctgttaaaatatacaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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