KEGG   Eucalyptus grandis (rose gum): 104428341
Entry
104428341         CDS       T03547                                 
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104428341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104428341
   03036 Chromosome and associated proteins [BR:egr03036]
    104428341
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104428341
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104428341
SSDB
Motif
Pfam: Nucleoporin2 Nup98_GLEBS
Other DBs
NCBI-GeneID: 104428341
NCBI-ProteinID: XP_010039642
UniProt: A0A058ZWT4
Position
4:complement(26931546..26939454)
AA seq 1022 aa
MFSGTNPFGQSSSSPFGTQSVFGQASNPTNPFAPKPFGSPNPFGTQTGSSMFGGTSTGVF
DATQPSSPFSTTPAFGASSSPSFGTSTPAFGASSTPAFGSSSSAFGGSSFFGQKPSFGGF
GSTPQTSPFGSTSQPSQPAFGGNVFGSSPTFGASSQSAFGGTSTPAFGSTSTPSFGASTS
AFGQASTPAFGSSTPFGSTGTAFGSSTTPGFGTGGAFGTSSAPLFGSSSTPAFGASSAPL
FGASSAPAFGASSTPAFGASSTPAFGASSAPAFGASSAPAFGASSSPSFSFGSSPAFGQS
TSAFGGSPFGATSSPFGSQIGGQATTPTFGTSGFGQSPFGGQRGGSRVAPYTPTTEADNG
SGTQGAGKLESISAMSVYKDKSHEELRWEDYQAGDKGGPNPAGQSAGAIGFGASSSTPSP
AFGQSSPFASNTTSNPFASKPFSTGFGSSATPSISPFSSSTASTAPSLFGSTPTPAFGAS
SSSSIFPTSGPSAFGSSPSVFSSPTMGSSPFASSFTSQSTPLFSSTTPSFGQTGFGQSTS
TFGQTASLFGQTTSPFVQTTTPSLGQTNMFNTPTGGFGGSSFPSTSQLPSTTPTGFSPIN
QSFSTPFQSSQPAQTTSLFSFGHVGQTQTAATGGFGTQNIFGQSNLGNPSATLTPAVMQP
VAVTNPFGTLPAMPQVSIGRTGTSSSIQYGISSMPVVEKPAPVRISSLLTSRHLSQRRIR
LPIRKYHPKSDAPKVPFFSEDEETPSTPKADALFIPRENPRALVIRPSEQWPSRTSTEKP
SPLKDTSGTGQENGGPVENGRVKDQTDHVRGSHKSNGDHDDHSVLKGDSSMTLNGHRAGE
AAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIK
FMGETDVRRLDLEALVQFNNREVIVYPDDNKKPPIGQGLNKPAEVTLLNIKCSDKKTGQQ
WTEGPKIEKYKEMLKKKAEDQGAEFVSYDPVKGVWKFKVRHFSKYKLEDEVDDWNVSAAS
ES
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgttcagcggaacgaacccttttgggcaatcatctagcagtccttttgggacccaatca
gtctttgggcaggcaagtaacccaaccaatccttttgccccaaaaccttttggtagccca
aacccttttggcactcaaacggggagctccatgttcggtgggacttcaactggtgttttt
gatgctactcaaccctcttcgcctttttctactacgcctgcctttggtgcttcatcttca
ccatcttttggaacttcaacacccgcttttggtgcatcatcaactcctgcttttgggagc
tcttcctcagctttcggtggatcttctttttttggacaaaagccttcttttggtgggttt
ggttcgacccctcaaacaagtccatttggaagcacaagtcagccatcacagccagcattt
gggggcaatgtttttggttcctcccccacttttggtgcatcaagtcagtcagcatttggt
ggtactagtactcctgcctttggttctaccagtacaccttcatttggagctagtacatct
gcctttggacaagcaagcactcctgcctttggttcaagcactccatttgggagcacaggc
actgcttttggctcatcaaccaccccagggttcggcactgggggagcttttgggacttcc
agtgcaccactttttggatcttcaagtacccctgcatttggcgcatccagtgctcctcta
tttggtgcttcaagtgctccagccttcggtgcttccagtactccagccttcggtgcttcc
agtactccagccttcggggcttccagtgctccagccttcggggcttccagtgctccagcc
ttcggggcttctagtagtccatccttcagttttggctcttctcctgcttttggccaatca
acctctgcatttggtggcagtccatttggagctacatcatccccttttggatcccagatt
ggaggccaggccacaacaccaacttttggaactagtggtttcggacagtcaccttttgga
ggtcagcgtggcggaagtagagtggctccttacacaccaacaactgaggcagataatggc
agtggaactcaaggagctggtaagctagagtcaatatcggcaatgtctgtatataaggat
aagagccatgaggagcttagatgggaggattatcaagcgggagataaaggtggaccaaat
cctgctggtcagtccgctggtgctattggctttggtgcttcttcttcaactccttcacca
gcatttggtcaatcatctccttttgcttccaacacaacctccaatcctttcgcttctaaa
cccttcagtactgggtttggatcctcggctacacccagcatttcacctttcagttcttca
actgcatcgactgcaccttccttgtttggatcgactccaactcctgcatttggtgccagt
tcatcatcatccatctttcctacatcaggcccttctgcatttggttcatcgccatcagtt
tttagttctccgactatggggagctctccatttgcctctagttttacctctcagtccacc
ccattattttcatctactacgccatcctttggccagactggctttggacagagcacttct
acttttggacagaccgcgtctctatttggacagactacatctccttttgttcagacaact
actccttcgttgggtcaaacaaacatgttcaacacacctactggtgggtttgggggaagt
tcattcccaagcacttcacagcttccttctacaactcccactggattcagtccaataaat
cagtccttctcgactccctttcaatcatctcaacctgcccaaacaaccagtctttttagc
tttggtcacgtgggtcagacacaaacagctgctaccggtggttttggtacccaaaatata
tttggccagagcaaccttggaaatccgtcggccaccctgacccctgctgtcatgcaacca
gttgctgtcactaatccattcggaacccttcctgcaatgcctcaagtatcaattggccga
actgggactagttcttctattcaatatggaatttccagcatgccagtggtggaaaaacct
gctcctgtccgtatatcctctttattgacatcccgacatttgtcgcagagacggattagg
ttgcctataaggaaatatcaccctaaaagtgacgcgccaaaggttcccttttttagtgag
gatgaagaaacacctagcacgccaaaggctgatgctcttttcattcctcgggaaaatcca
agggctctggttatccgtccatctgagcagtggccttcaagaactagcacagaaaagcca
tctccattgaaggacacatctggaactgggcaggaaaacggaggtccagttgaaaatggt
cgtgtgaaggatcaaacagatcatgttagaggcagccacaaatcaaatggagaccatgat
gatcactctgttctgaaaggtgactcctcaatgacactcaatggacacagggctggtgag
gctgcaatagtgtatgagcatggtgcagacattgaggcactaatgcccaagctccgtcac
tccgattactacactgagcctagaatccaggagctggctgccaaggaaagggctgagcca
gggttctgccgccgtgtcaaggacttcgtcgtggggcggcatggttatggaagtatcaag
ttcatgggtgagactgatgttcgacggcttgatcttgaagcccttgtccagtttaacaac
cgagaggtgattgtttacccggacgacaacaagaaacctcctattggacaaggtctcaat
aagcccgctgaagttacacttcttaacatcaaatgttctgacaagaagactggacaacag
tggacagaagggcctaaaattgagaagtacaaggagatgctcaagaagaaggctgaggat
caaggtgctgagtttgtgtcgtatgaccctgtcaaaggagtgtggaagtttaaggtcagg
cacttcagtaagtacaagcttgaagatgaagttgatgattggaatgtatctgctgcctct
gagtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (85)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (101)   

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