KEGG   Eucalyptus grandis (rose gum): 104429276
Entry
104429276         CDS       T03547                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
  KO
K10900  werner syndrome ATP-dependent helicase [EC:5.6.2.4]
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egr03032]
    104429276
   03400 DNA repair and recombination proteins [BR:egr03400]
    104429276
Enzymes [BR:egr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     104429276
DNA replication proteins [BR:egr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104429276
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     104429276
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind UBA ResIII T4SS-DNA_transf
Other DBs
NCBI-GeneID: 104429276
NCBI-ProteinID: XP_039155107
Position
8:complement(62892131..62899710)
AA seq 877 aa
MNGEAVDGDAAVAKLVEMGFEYSSAVEAVKVVGASIDDAVEYILNGPSRTNLGASTSSNC
SKVCVKASGKRASSLSQPSGKMQQSNILDHFGTKMQTKRSKFNVAKDALNAGSKVSPVME
GNGNVHPDMHRDTKIKSEIIAVDCPVELRLGADWEQQVSSLLRKHFGHASLKSFQREALA
AWLSNQDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFL
GSGQPDNSVEKKAMEGKYGLIYVCPETVLRLIKPLQSLAAGRGIALFAIDEVHCVSKWGH
DFRPDYRKLSVLRENFSTSKMKFLKFDIPLMALTATATNRVREDVIRCLCMSKETKIVLT
SFYRSNLRFSVKHSRTSSRTYKKDFHVLIKTYGLRRKIGDNQHLDCAEDSDNTSVCSEDD
YCDRYEDDEANLVKNDNTSSRETGLSVEFLEDETDTFQGVDDWDVPCGEFHGESPDLSQE
VCSSFEMSDSPMELEERLKLQQEPLDHGPTIIYVPTRKETVTIAKFLCDFGIKAAAYNAK
LSKSYLRQVHKEFHEDNVEVVVATMAFGMGIDKLNVRRIIHYGLPQSLEAYYQEAGRAGR
DGKLADCILFANLARTPTLLPSKRSENQLKLAYTMLSDCHRYGMNTANCRARSLVEYFGE
HFSHEKCYLCDVCIKGPPEMLDVREEADIFMQVLAAHKKQYALSRGNSGYIADSYDDDIT
RRDVKQRQYVEKLYLKLLVSKIREQSPKYMAIDMLWWQGLARVMESKGYIKEGDEKAHVQ
IKYPELTERGWDFVQSQREESLYIFPEADMLLAGRKRRSFSTFSEWGKGWADPEIRRQRL
GRRRSNRKPRERKSKGFKASQKTVRGRLSKLLKLKSK
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgaatggtgaagctgtcgatggtgatgccgctgttgcaaaacttgttgaaatgggattt
gaatattcttcagcagtagaggctgtgaaagtggttggtgcttcaatagatgatgcggtt
gagtatatcctcaatggcccttcgagaaccaatttgggtgcatcaacaagttctaactgt
tccaaagtttgtgtaaaagcttcaggcaaaagagcttcgtccctgtcacaaccctcaggg
aaaatgcagcaatctaacattctggatcattttggtacaaaaatgcaaaccaaaagaagt
aaatttaatgtggcaaaagatgctttgaatgcggggtcaaaagtctcacctgtcatggaa
ggaaacgggaacgtccatcctgatatgcatcgagacaccaagatcaaatcagaaattatt
gctgttgattgcccagtagagctgcgtctgggagcagactgggagcagcaagttagtagt
ctcttacggaagcactttggtcatgcatccttgaagagtttccagagagaagctttggct
gcttggctatctaaccaagattgccttgttctcgctgcaacaggatctggtaaatcactg
tgtttccagattccagccctactgactgggaaggtggttgttgtgatctcaccattgata
agtttaatgcatgaccagtgtctaaagctcgcaaaacatggtgtctctgcctgctttctt
ggatctgggcaacctgacaatagtgtggaaaagaaagcgatggagggaaaatatggtttg
atatatgtttgcccagagacggttttaaggctgataaagccactacaaagtcttgcagca
ggccgaggaatcgcattatttgcaattgatgaagtccactgtgtttcgaaatggggccat
gattttcggcctgactacaggaaactatctgtgttaagagagaacttcagcacttccaag
atgaagttcttgaaatttgacatcccactgatggctttgactgctactgctactaaccgt
gttcgagaagatgttattcggtgcctttgcatgtcaaaggagacaaagattgtgcttaca
tcattctaccgctccaatctacgtttttccgttaagcatagcagaacttcttcacggact
tacaaaaaggatttccatgttttgataaaaacatatggtttgagaagaaagatcggtgac
aaccagcatctcgactgtgctgaagattccgataatacatcagtatgttcagaggacgat
tactgtgacagatatgaagatgatgaagcgaatttggtgaaaaatgataacacttcttca
agggagacaggattgtcagttgaattcttagaagatgaaacggacaccttccagggtgtg
gatgattgggatgttccctgtggagaattccatggagaatctcctgatttaagccaggag
gtatgcagttcttttgagatgtctgattcaccaatggaactggaggaaaggctgaagctt
cagcaagagccattagatcatggacctactattatttatgtccctacgaggaaagaaact
gtgacaattgccaaattcttgtgtgacttcggcatcaaagcagcagcttataatgccaag
ttgtcaaaatcatatcttaggcaagtccacaaggaatttcatgaggacaacgtagaggtt
gttgttgcgactatggcttttggaatggggatcgacaagttaaatgtcagaagaatcatc
cactatggtttgccacagagtttagaagcatactatcaagaagcagggcgtgctggaagg
gatggaaaattagcagattgcatactctttgctaatttagcaagaacaccaactctgttg
cctagtaaaaggagtgaaaatcagttgaaactagcgtacacaatgctgtctgattgtcac
agatatggaatgaacactgcaaactgtcgagctagatcactcgttgagtactttggggag
cacttcagtcacgagaagtgctacttgtgcgatgtgtgcattaaaggacctcctgagatg
ctggatgtgagggaagaggctgatattttcatgcaggttctcgctgctcacaagaaacaa
tatgctttgtctcggggaaacagtggatacattgccgactcatatgacgatgatataaca
cgtcgtgacgtcaaacaaagacagtatgttgagaagctatatctcaagctcttggtcagt
aaaatcagggagcagtctcctaagtacatggcaattgacatgttatggtggcaaggtctt
gctcgagttatggaaagtaaaggatacatcaaagagggtgatgagaaggctcatgttcag
atcaaatatcccgagctaacagaaagaggatgggattttgtgcaatcacaaagagaggaa
agcttgtacatatttcctgaagctgatatgcttctcgcggggagaaaacggagatcattt
tccactttttctgaatggggtaagggctgggctgatcctgagatacgtcgccagcggttg
gggaggaggcgatcaaacaggaagccaagagaaaggaaatcaaaaggttttaaggccagt
cagaaaactgttcgaggaaggctatctaaattattaaaactaaaatcaaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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