KEGG   Eucalyptus grandis (rose gum): 104433904
Entry
104433904         CDS       T03547                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egr04131]
    104433904
   04121 Ubiquitin system [BR:egr04121]
    104433904
Enzymes [BR:egr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104433904
Membrane trafficking [BR:egr04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104433904
Ubiquitin system [BR:egr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104433904
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_11 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-ANAPC11 zf-Nse
Other DBs
NCBI-GeneID: 104433904
NCBI-ProteinID: XP_010045099
UniProt: A0A059D936
Position
2:complement(55496219..55498731)
AA seq 328 aa
MNTGEETHWCHQCTRPIGLQGGEVICPYCDGGFVQELQEVQALASADVSAPYPMDLSPQV
NPVFDAFFAMIGDNVLDRRSRILRFVDLVTRDPSFDVRGRPAGRRPRLDESDDYSMSPGL
DQLMEQLSVDGRRGPLDQLMEQLSVDGRRGPPPGLDQLIEQLYVDGRRGPPPAPQSAIAA
LPTIKITWTHLRDDSECPVCKEEFELQAEAKMMPCHHFYHPDCIVPWLEQHNSCPVCRFE
MPPLGTGSVRGGQSWSDQSRSSSSSTLRSGDRGRDGGRQNQWRGRLFPRPSDSSNSNTQQ
YTETRGSNSRTIHEQNHEMNYSGWPFDY
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaatactggagaagagacgcattggtgccatcagtgcacccggccaattgggcttcaa
ggcggagaagtaatttgcccttactgtgatggaggctttgtgcaagaacttcaggaggta
caggctctggcatcagcagatgtttcagcgccgtacccaatggatctctctcctcaagtg
aatccagtatttgatgctttctttgctatgataggcgataatgttctcgaccgcagaagc
agaattcttcgctttgttgatttggtaacgagggatcctagttttgatgtcagaggacgt
ccagcaggtcgaagaccaaggttagatgagtcggatgactactccatgagcccgggactt
gaccaattgatggaacagctctctgttgatggaagaaggggtccacttgaccaattgatg
gaacagctctctgttgatggaagaaggggtccacccccgggacttgatcaattgattgaa
cagctctatgttgatggaagaaggggtccacccccggcacctcaatcggcaatcgctgca
ttgccgaccatcaagatcacttggacacatcttcgggatgattcggagtgtcctgtctgc
aaggaggaattcgagctgcaagctgaagcaaagatgatgccttgccaccacttctatcac
cctgattgcattgtgccttggttggaacagcacaattcctgtcctgtttgccgcttcgag
atgcctccgctgggtacaggttctgttcgggggggtcaaagttggagtgaccagagtaga
agcagcagcagcagcactctaaggagtggtgaccgtggcagggacggtgggaggcaaaat
cagtggaggggtcgtctattcccacggccttctgattcatcaaattctaatacccagcag
tacactgaaacaagaggaagcaactcgagaaccattcatgaacaaaatcatgagatgaat
tactccggatggccatttgattactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (52)   

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