KEGG   Eucalyptus grandis (rose gum): 104453152
Entry
104453152         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03020  RNA polymerase
egr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104453152
  09124 Replication and repair
   03420 Nucleotide excision repair
    104453152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104453152
   03400 DNA repair and recombination proteins [BR:egr03400]
    104453152
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     104453152
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104453152
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac DDR
Other DBs
NCBI-GeneID: 104453152
NCBI-ProteinID: XP_010065975
UniProt: A0A059BBW8
Position
7:26284318..26291094
AA seq 321 aa
MEGGGGASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEV
NSSVLNDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQT
LDVTSKDLISSDHTVVPVDFSDALADDSAEQKGITIVKLRRGQELRLRAIARKGIGKDHA
KWXPAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPEAY
TYDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRL
SEDTVEADDQFGELGAHMRGG
NT seq 966 nt   +upstreamnt  +downstreamnt
atggaagggggcggcggcgcgtcgtaccagcggttcccggtggtgaaggtccgggagacg
aaggacgactacctcaagttcgagctccgggggacggacgccagcgtggccaacgccctc
cgccgcgtcatgatcgcggaggtccccaccatcgccatcgacctcgtcgagatcgaggtc
aactcctccgtcctcaacgacgagttcatcgcccaccgcctcggcctcgtccccctcacc
tccgaccgcgccatgtccatgcgcttctcccgcgactgcgacgcctgcgacggcgacggc
cagtgcgagttctgctccgtcgagttccacctccgcgccaagtgcatgaccgaccagacc
ctcgacgtcaccagcaaggacctcatcagctccgaccacaccgtcgtccccgtcgacttc
tccgacgccctcgccgacgattccgccgagcagaagggaattactattgtgaagcttcgc
cgagggcaagagctaaggctgcgagcaatagcaagaaaaggaattggcaaagatcatgca
aagtggntccccgcagccacagtgacattcatgtatgaacctgaaattcacatcaatgaa
gatttagtggaaaccttgtcccttgaggaaaaacaaagttgggtggaaagcagtcccacc
aaagtgtttgacatcgatccaaatactgagcaggtgctagtggttgatcctgaggcttac
acttatgatgaagaagtaataaaaaaagctgaagccatggggaagccaggtcttgtggag
atatatgcaaaggaggacagttttatattcactgtcgaatccactggagcaattaaagct
tcacagttggtactcaatgccatagacgtgttgaagcaaaaactggatgcagttcgctta
tcagaagatacagtggaagctgatgatcaatttggggagctaggcgctcatatgcgcgga
ggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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