KEGG   Elaeis guineensis (African oil palm): 105038413
Entry
105038413         CDS       T03921                                 
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:egu03016]
    105038413
Enzymes [BR:egu01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     105038413
Transfer RNA biogenesis [BR:egu03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    105038413
SSDB
Motif
Pfam: UPF0004 Radical_SAM TraT TRAM
Other DBs
NCBI-GeneID: 105038413
NCBI-ProteinID: XP_010912525
UniProt: A0A6I9QQQ8
Position
2:complement(25359116..25365476)
AA seq 617 aa
MEDIEDVVATGAPPGLRLPLTAVGMKPKKKPRARLTRDPLSNPQIPGTQTIYMKTFGCSH
NQSDSEYMAGQLSAFGYAVTDEPEEADLWLINTCTVKSPSQSAMTTLISKCQSAKKPLVV
AGCVPQGSRDLKELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRKN
RFIEILPINVGCLGACTYCKTKHARGHLGSYTVNSLVERVKMVVSEGVKEIWLSSEDTGA
YGRDIGMNLPVLLNSIVAELPPDRSTMLRIGMTNPPFILEHLKEIANVLRHPCVYSFLHV
PVQSGSDSVLAAMNREYTVSEFRTVVDTLIELVPGMQIATDIICGFPGETDEDFAQTVSL
IKEYQFPQVHISQFYPRPGTPAARMKKVPSVVVKKRSRELTNVFESFSPYKGMEGRVERI
WITEIATDGIHLVGHTKGYIQVLIIAPEGMLGTSTDVKITSVGRWSVFGEVIETPSAQVK
ENTYQGNITLEAFPCPGSCDKEPEPCQCAVQDMGQQISDCGPDESPVAIVINSSTTRIQV
GRNFISSVQSVLLKKRRQQGSMRMNDVNANKFPENRETRRMSAKLSTMDWILLGGMIVSF
LTTVGLLILLSSRMLSS
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggaagacatcgaagacgtggtggccaccggagctccaccggggctccgcctccccctc
accgcggtcggcatgaagcccaaaaagaagcccagggctcgccttacccgcgacccccta
tccaaccctcagatcccggggacgcagactatatatatgaagaccttcggatgctctcat
aaccagagcgacagtgaatacatggctggtcagctctcggcatttgggtatgcagtgact
gatgaacctgaggaggcagacttatggctaataaatacatgcacagtgaagtctcctagt
caatctgccatgacaactctcatatcaaaatgtcaaagcgcaaagaagccacttgtggtg
gcaggatgtgtacctcagggaagtagagatctgaaggaacttgaaggggtcagtgtaatc
ggggtgcagcagatagatcgtgttgttgaagtagtagaggagacactgaaagggcatgaa
gtccgcctattaagccggaaaacattgcctgcattagaccttcctaaggttaggaagaac
agatttattgagatacttccgattaatgttggttgtctaggtgcttgcacttattgcaag
acaaagcatgcccgtggtcatctagggagctatacagtgaatagccttgttgagcgcgta
aaaatggttgtatctgaaggagttaaagagatatggttgagcagtgaagataccggtgct
tatggtcgggatattggaatgaatcttccagttttactaaattccattgttgcggaactt
cctcctgatagaagcaccatgcttcgcattggcatgactaatcctccttttatactggaa
catttgaaagagatagcgaatgtattgcgccacccttgtgtgtactcatttctgcatgta
cctgtgcagtctgggagcgactctgtcctggctgcaatgaatcgtgagtacacagtgagc
gagtttagaacagtggtggacactctaatcgaacttgtacctgggatgcaaattgccact
gatattatatgtggattccctggtgaaactgatgaagattttgcacaaactgtcagtctg
ataaaggagtaccaattccctcaagttcatatttctcaattttatcctagacctgggact
cctgctgcaaggatgaagaaagttccaagcgttgtagtgaagaagcgtagtcgtgaattg
actaatgtatttgaatctttttccccctacaaaggaatggaaggtcgagttgagaggatt
tggattactgaaattgccactgatggaattcatttggttggccatactaagggatatatc
caggtgcttataattgctccagagggtatgctaggtacctcaacagatgtaaagattaca
tctgtgggaaggtggtccgtttttggtgaagtgattgagactccttcagctcaggtaaaa
gaaaatacataccaagggaacattaccttggaagcttttccttgtcctggttcatgcgac
aaggagccagagccctgccaatgtgccgtgcaggatatggggcagcagatcagcgattgt
ggtcctgatgaatctcctgttgccattgttataaacagctcaaccacaagaattcaagta
ggaagaaattttattagttcagttcagtctgtgctgctgaagaagagaaggcaacaaggg
tcgatgaggatgaatgatgtgaatgcaaataaattcccggagaaccgggagacaagaaga
atgagtgctaaattatctaccatggattggattttgctgggtgggatgattgtcagcttt
ctaacaaccgtaggtctgctaatattgctttcatctaggatgttgtcatcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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