KEGG   Elaeis guineensis (African oil palm): 105049426
Entry
105049426         CDS       T03921                                 
Name
(RefSeq) protein SMG7-like isoform X1
  KO
K14409  protein SMG7
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105049426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105049426
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     105049426
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105049426
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 105049426
NCBI-ProteinID: XP_010927363
UniProt: A0A6I9RJJ6
Position
8:1292386..1304050
AA seq 982 aa
MMTIPINNSSAPSLRERVQSLYNKNIELENRLRKSAKLKAPSDLNAWLQMRENCEAIILQ
DHEFSEKHEIEHVLWQLHHRRIEEFRAHINNAALRGGVSTLQGGKSPPHPDRIKKICAIF
KGFLSEATGFYHDLMLKIRAKYGLPMDCFSEAPEYQITLSKDEKKSFEMKKGLISCHRCL
IYLGDLARYKGLYGEGDSVSRDYAAASGYYMQAASLWPSSGNPHHQLALLASYSVDDLLA
LYWYFRSLAAISPFLTARDNLIIAFEKNRQNYSQLPGNSRLSSARALPSRVTGKGRGRGD
FRPLAKETKVEHALAKELELSTPEVLKSFSTRFVRLNGILFTRTSLETFGEVFALVIRDL
LELLSSGPEEHLNFGQDAAENGQVIVRLIAIVIFSVHNAKRDSEGQSYAEILQRKVLLEN
AFTAAFDFVGHIIKRCTELLDAASSYLLPAILVFMEWLACHLDIANGIDIEEKQATARSF
FWNQCVSLMNKLMLTGLVDRDKDKTCFFEMSWYDDGERGNRLALWEDFELRGFSPLAPAQ
LILDFSRKYALENDVSNKEKSARVKRILAAGRALMNIVRIGQQEIYYDSKQNKFMIGTKA
AACEDLDVCGSDDFQIIRPVGNTGMMQSNTANLQAKQSWGKLFVDGEEEDEVIVFKPMAA
EKDTNMSASESTAFEYIQPVQSSFKGDQTTNGGSLSAAFSNIQMSASLNGILQPPITVCG
VSQPPAQHITQSTSRWSMYHESSVGGLKSLNFAKNELCTNPDLLNGPSSSATFFPSLSAT
TNLSTSSSTMLSGHIRAGEAVIPAEADSIVSLGATSNGLNMKVSAALPAPRKSPVSRPAR
HFGPPPGFSKNAAKQLEDSNTKFIIKERQPQMDDYSWLDGYETLSTTGLGMENSINRAAH
MYPQVTASNSNSRTGDIGFPFPGKQTRAAQTEMTYEKKWQDFQLFEHLKLHAEQQLPQAS
QQSALLPEQYQAQSLWSSRFFV
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgatgactataccaataaataactcatctgctccctcgttacgggagcgtgtacaaagt
ctttacaataagaatattgaattggagaatcgattgaggaagtcagcaaagttgaaagct
ccttcagatctcaatgcatggcttcaaatgcgtgaaaactgtgaggccataattcttcaa
gatcatgaattctctgaaaagcatgagatagagcatgttttatggcaattacaccacagg
aggattgaggagttccgagcacacattaataatgcagcattgagaggtggagtaagcaca
ttgcaaggtgggaagagtcctcctcatcctgatcgaataaaaaaaatctgtgctattttt
aaaggttttctttcagaagcaactggattttatcatgatttaatgcttaaaatcagagca
aaatatggcttgcctatggattgtttttctgaggctcctgaataccaaattacactgtca
aaggatgaaaagaaatcttttgaaatgaagaaagggctgatctcttgtcaccgctgttta
atatatttgggtgatcttgctcgttacaagggattgtatggagaaggggactctgtcagt
cgagattatgcagcagcttctggttactacatgcaggctgcttctctttggccttcaagt
ggcaatccacatcatcagcttgcactacttgcatcatattctgttgatgatttgctggca
ctctattggtattttcggagcttggcagcgattagtcctttcttaacggccagggacaat
ttgattattgcatttgaaaagaaccgccaaaattactcccagcttcctggtaattccaga
ctttcttctgctagggcgttgcctagtcgagtgactgggaaaggaagaggacgaggagat
ttcaggcctttggcaaaggagacaaaagtagaacatgctcttgcaaaagaactagaactt
agtaccccagaggttcttaaatctttttccacccgatttgttcgacttaatggcatcctt
ttcacaaggacaagcttggaaacttttggagaagtatttgctctggtcatcagggatctt
ctcgagcttctttcttctggacctgaggagcacctaaattttggtcaagatgctgcggaa
aatggacaggtcatcgtgaggcttattgccattgtcatattctcagttcataatgcaaag
agagattctgaaggccaatcatatgctgaaattttgcagcgtaaagtgttgcttgaaaat
gcatttacagctgcctttgattttgtgggacacataataaaaagatgcacagagttgctt
gatgctgcatccagttatcttctgccagctattctggttttcatggagtggcttgcatgc
catttagatattgcaaatggcattgatattgaagaaaaacaggccactgcaaggtcattc
ttttggaatcagtgtgtctcactgatgaacaaactaatgctgactgggcttgttgatcgt
gataaggacaaaacctgcttttttgaaatgagctggtatgatgatggggaaagaggtaac
aggcttgcattatgggaggactttgagttgagagggttttcacctttagcgccagcacaa
ctcattttggacttttcaaggaagtatgcacttgaaaatgacgtgagcaacaaggagaaa
agtgctcgtgtaaaaaggattcttgcagcaggtcgggctcttatgaatattgttcgaatt
ggtcagcaggaaatttattatgactcaaaacagaataaatttatgataggtacaaaggct
gctgcatgtgaagatttagatgtatgtgggtcagatgatttccaaataataagaccagtt
gggaatacaggaatgatgcaatcaaatacagctaatctgcaagccaaacaatcttggggg
aagctatttgtggatggagaagaagaagatgaagtaattgttttcaagcctatggctgcc
gaaaaggacaccaacatgagtgcttcagagtcaactgcttttgaatatattcaacctgta
caaagttccttcaaaggtgaccagacaactaatggtggctcgctttctgctgctttcagt
aatattcagatgtcagcttctctaaatggcattttgcaaccaccaataactgtgtgtggt
gtttctcagccacctgctcagcatatcactcaaagcacttcaaggtggtctatgtatcat
gaatcatctgttggtgggctgaagagtttgaattttgctaaaaatgaattatgcaccaat
ccagatctgctaaatggcccgagtagttctgctacattctttccatcactttctgcaact
accaatctcagcactagctccagcactatgttatctggtcatataagggctggtgaagct
gttataccagcagaagctgattccatagtgtctttaggagcaacttctaatggtctgaat
atgaaagtctcagcagctctgccagctccaaggaaaagccctgtaagccggcctgctagg
cactttggaccgccacctggatttagcaagaacgctgctaagcaactggaagactccaat
actaaatttattatcaaggaacgacagcctcagatggatgactatagctggctagatgga
tatgagacattatcaacaactggcttggggatggaaaattccatcaatcgcgctgcacat
atgtatccacaagtcactgctagtaatagcaacagtagaactggtgatattggctttcct
tttcctggaaaacaaactcgtgcagctcagactgagatgacgtatgagaagaagtggcaa
gatttccagctctttgagcatttgaagttgcacgcagaacagcagcttccccaagcaagt
cagcagtctgctctgctgccagagcagtatcaagcacaatctttatggtctagccgtttc
tttgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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