KEGG   Elaeis guineensis (African oil palm): 105054786
Entry
105054786         CDS       T03921                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105054786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egu03400]
    105054786
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     105054786
SSDB
Motif
Pfam: Ku Ku_PK_bind Ku_N
Other DBs
NCBI-GeneID: 105054786
NCBI-ProteinID: XP_010934678
Position
12:complement(11735265..11755938)
AA seq 708 aa
MARNKEAVVLLLDVGPSMHSVLPEVERVCSMLVQKKLIFGKSDEVGFVLFGTDDTYNELQ
KEVGGYEHIVVLRNIGVVDGNAVGFLQNLPRGNFPGDFIDAIVVGIDLLIKKFGPTNKGK
QRICLITDAKYPIKEPYEGTKEDQVNTISQMMQTHGIRLDCIVIREKLPGADLRVMEEND
SLLDQFSRKAIAKIVHVDSPTSLLGALKTRNISPVTVFRGDLELSSTMKIKVWVYKKTSE
EKFPTLKKYSGKAHSSDKFATYEVKVDYEYKSMEDPDKVVPPEQRIRGYRYGPQVVPISS
AEWEAVKFKPEKGVKLLGFTDASNILRHYYMKDVYIFIPEPGNQKAIVAVSAIARAMKDM
NKSAILRCVWRQGQGNVVIGVLRPNISSVDNIPDSFYFNVLPFVEDVREFQFPSFRSFPS
SWQPNEQQQEAADNLVKMLDLTPSEGEEVLQPDYTPNPVLEVSYCFTQTVSPTCYDKIRR
FYHFLDLKSKQPDADVPPLDRNLRGITEPDPAVFSCHKSVIDNFHKNFELKEKPKKKKSS
KRAWRGKPSASSEEEGVDGEASGFQSSNLMKDSSNINVEKIGNLNPVQDFEAMMARRDSS
KWVSKAIKEMQNHVSDLLENSYEGDAYSKAIECLLALRKGCILEQEPKEFNRFLLGLYEK
WKDTDLANFFELLSSKNITLISQKEAPDSNVTEEDAKNFPVKAELKSQ
NT seq 2127 nt   +upstreamnt  +downstreamnt
atggctcgtaacaaggaagcggtggttttgctactggatgttggtccgtcgatgcatagc
gttctccctgaggttgaaagggtctgctcgatgctcgtacagaagaagctaatttttggt
aagagcgacgaagtggggtttgtcttatttggaaccgacgatacatacaatgagcttcaa
aaggaagtgggtggatatgaacatatagtggtcttacgtaatattggagttgtcgatgga
aatgcagtgggttttctacaaaatcttccgagaggaaatttccctggtgactttattgat
gccattgttgttggaatagacttgctgataaagaaatttgggcctacaaacaagggaaaa
cagcgcatttgtctcatcactgatgcaaagtatccaattaaagagccgtatgaggggaca
aaagaagatcaagtcaataccatctctcaaatgatgcaaactcatggaataagactcgat
tgtatcgttatcagagaaaaactaccaggagctgatctgagggtaatggaggaaaatgat
agtctattggatcagttctcaaggaaggcaatagcaaaaatagtacatgttgatagccca
acatcattgttgggtgctcttaaaactcgaaatatctccccagtgacagtgttcagggga
gatttggaactaagctcaacaatgaagatcaaggtatgggtttataaaaaaacatctgag
gagaaatttcctacattaaagaagtattctggcaaagcacattcatctgataaatttgct
acttatgaagttaaagttgattatgagtacaaaagcatggaagatcctgataaagttgtt
ccaccagaacaaagaatcagaggttatcgttatgggccacaagtagttcctatatcatca
gctgaatgggaggcagtaaagttcaaacctgagaagggtgtaaagctgttaggatttaca
gatgcttccaacatattgcggcactactacatgaaggatgtatatatctttattcctgaa
ccgggcaaccaaaaagcaattgttgcagtttctgctatagctagagccatgaaggatatg
aacaagtctgctattttgcggtgtgtttggaggcaaggtcagggaaatgttgtgattggg
gtgttaaggcccaacatatcttctgtggacaatattccagattccttctactttaatgtg
cttccttttgttgaggatgttcgagaatttcaatttccatccttcagaagtttcccatca
tcatggcagccaaatgaacaacagcaagaagcagcagataaccttgtcaagatgttagac
cttacaccatctgaaggagaagaagtgctgcaacctgactacacaccaaatcccgtcctg
gaggtgtcctattgctttactcaaacagtctctcctacctgctatgataaaatcagacgg
ttttatcactttctggacttgaagtcgaagcagccagatgccgatgtgcctccacttgat
agaaaccttagggggataactgaacctgatcctgctgttttttcttgccacaagtctgta
attgataacttccacaaaaattttgagctgaaggagaaaccaaagaaaaagaagtcttct
aaacgtgcctggaggggaaaaccatcagcttctagtgaggaggaaggtgtcgatggtgag
gcatctggctttcagagttctaatttaatgaaagattcgtctaacataaatgttgaaaaa
attggaaatctgaatcctgtccaagattttgaagccatgatggcacgtagagacagttca
aagtgggtcagcaaagcaataaaagagatgcaaaatcatgtttctgatttgttagaaaat
tcttatgaaggggatgcttacagcaaggcaattgaatgcttgctggctctacggaaaggt
tgtattcttgagcaggaaccaaaggaattcaatcggtttctgcttggtctttatgagaaa
tggaaagacactgatcttgcaaatttttttgagctgctttcatctaaaaatatcacattg
atcagccaaaaagaagcacctgacagtaatgtgacagaagaggacgccaaaaatttccca
gtcaaagccgagctaaaatcccagtag

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