KEGG   Elaeis guineensis (African oil palm): 105057676
Entry
105057676         CDS       T03921                                 
Name
(RefSeq) DNA helicase INO80
  KO
K11665  chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105057676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:egu03036]
    105057676
Chromosome and associated proteins [BR:egu03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    105057676
   INO80 complex (yeast)
    105057676
SSDB
Motif
Pfam: SNF2-rel_dom DBINO Helicase_C ResIII DEAD HDA2-3
Other DBs
NCBI-GeneID: 105057676
NCBI-ProteinID: XP_010938660
UniProt: A0A6I9S7W5
Position
14:11604089..11621993
AA seq 1535 aa
MDPRRHHKNAGNGLSYSNLFNLESLMSFQVPRLEDDFDNYGNDSQDESRSSQGQGTMLDH
CNGASTVRSSELSRRQKRRLVGSEAASNSSLWGDANSSDEDDEDYESQITEEQYRAMLGE
HVQKYRRVRLRDSSSGLASARTAMPGLKRSNGTKVGKYSSEPIVSAKEEGALWEIERSPE
HYEADFDLEYGGVSRFSSSTDSAYLDIGEGITYRIPPTYDKLVTTLKLPSFSDIRVEEYF
LKGTLNLPSLAAMMATDRRFEAWNQSGLGEPQPRYESLQARLKSFPSGNSNQKFTLQVCD
VDLDPFSIPEGAAGRIRRSIMSENGTLQVCYVKVLEKGDTYEIIERSLPKKQIVKKDPSV
IEKEQAEKIGRLWVNIGRRDIPKHHRIFTNFHKKQLADSKRFSETCQREVKLKVSRSLKL
VRGAAIRTRKLAKDMLIFWKRIDKEQAELRKKEERDAAEALKREEELREAKRHQQRLNFL
LSQTELYSHFMQNKSTAPPVETLSLAEGESKAPEEGLILGDVKPGEEEDPEEAELKREAL
RAAQQAVSQQKKITNAFDNECLKLRQAAEANVPADDSSIAGSSDIDLLHPSTMPVKSTVQ
TPELFKGTLKEYQLRGLQWLVNCYEQGLNGILADEMGLGKTIQAIAFLAHLAEEKNIWGP
FLVVAPSSVLNNWADEIDRFCPDLKILPYWGGLQERMVLRKNINPKRLYRREARFHILIT
SYQLLVTDEKCLRRVKWQYMVLDEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMA
ELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAVLKPFMLRRVKK
DVITELTGKTEVTVHCKLSSRQLAFYRAIKDKISITELCNGSRGHLNDKKIVNLMNIVIQ
LRKVCNHPELFERNEGSSYFYFADIPNSLLPPPFGELEDIHYAGDWNPITYKVPKLVHEE
IIQNAEMPSSVSGCRIQCRSLKRLFNIFSPDNIYESTVSQYRCSNDYCMSDGAFGFTRLI
DLSPAEVSFLANCSVLERLVFSVMRWDRQFIDETLDLFMDLEGDDLQYNHLDKGTVRAVA
RMLLLPTKSEASLLRRRLATGPGDDPYEALVSSHQDRFISNTRLLHATYFFIPQARAPPI
NAQCPDRSFAYQMVEELHHPWTKKLFVGFARTSEFNGPRRPIDPHHLIQEMPSESYVPPL
LELPYSIFGSSPPMRSFDPAKMLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE
DYMNYRKYRYLRFDGSSNLMDRRDMVRDFQRRNDIFVFLLSTRAGGLGINLTAADTVIFY
ESDWNPTLDLQAMDRAHRLGQTREVTVYRLICKETIEEKILQRASQKNTVQQLVMTGGHV
RGDLIPEDVVSLLLDDAQLDQKLRETSLQAKDRQKKKRVTKGIHVDAEGNVSLEDLMQDA
EYEPENATNKKRKSDSQKKNPPKPRNPQKIAKNTDLPEELDEPSPIGYEEDQIMQQRPKR
PKRPTKSVNENLEPVFNSTANMLTTNSTNVSAVII
NT seq 4608 nt   +upstreamnt  +downstreamnt
atggacccgcggcgccaccacaagaacgccggcaacggcctttcgtattccaatctcttc
aatcttgagtctttgatgagctttcaagttccccggctagaagatgattttgataactat
ggcaatgacagtcaggatgagagcagaagtagccaaggtcaaggaaccatgctggaccat
tgtaatggagccagcactgttaggtcttcagaattgagtaggaggcagaagaggcgttta
gttggatctgaggctgcatcgaactcatccttatggggagatgctaatagtagtgatgag
gatgatgaagactatgaatcacaaatcactgaggagcagtaccgtgcaatgctcggagag
catgtacaaaagtataggagggtgaggcttagagattcctcatcagggttggcttctgct
cggacagcaatgccaggtctgaaacgcagtaatggtacaaaggtggggaagtacagtagt
gagcctatagtttctgcaaaggaagagggagcattatgggagattgaaagatcaccagag
cattatgaggctgattttgatttggaatatggtggggttagcaggttttcttcctctact
gattccgcttatttggatatcggggagggtatcacatataggatacctccaacttatgat
aagcttgtgactaccttgaaactgccaagtttttcggacattcgggtagaggaatatttc
ctgaagggcacattgaatttaccatctctggcagctatgatggctacagatcgaagattc
gaggcttggaatcaaagcgggttgggtgagcctcaaccacgatatgaatcacttcaggcc
agattgaagtcatttccatctggaaattcgaatcagaagttcactctccaagtgtgtgat
gttgatctggatcccttctcaattccagaaggagcagctgggaggatacggcggtcaatt
atgtctgaaaatggtaccttacaggtctgctatgttaaagtcttggaaaaaggggataca
tatgagattattgagcgcagcttgcctaagaagcaaatagtgaagaaagacccttcagta
attgagaaagagcaggcagagaagattgggagattgtgggtgaatatcgggagacgagat
attccaaagcatcacaggatatttactaattttcataagaaacagcttgctgattccaaa
cgcttctcagagacttgccaaagagaggtaaaattgaaggtgagcaggtcactcaaattg
gtgagaggtgctgcaattcgtactagaaagcttgctaaagacatgctgatattctggaaa
agaatagataaggagcaggcagaactgaggaagaaagaagaaagggatgcagctgaagct
ttgaagcgtgaggaagagcttcgtgaagcaaagagacaccagcagaggctcaactttctc
ttgtcacaaacagagctgtacagtcattttatgcagaataagtctactgcaccaccggtt
gaaaccttatccctggcagaaggtgaatctaaagctccagaagagggattgatccttgga
gatgtcaaaccaggagaggaagaagatcctgaggaagctgaattaaaaagggaagctttg
agggcagctcaacaagctgtctcccagcaaaagaagataacaaatgcatttgacaatgaa
tgtttgaagctgcgccaagctgctgaagctaatgttccagcagatgattcatctattgca
gggtctagtgacatagacctactgcatccctcgacaatgcccgtaaaatcgactgtgcag
acaccagagttgttcaaaggcactcttaaagaatatcagttgaggggattgcagtggctc
gttaattgttatgagcagggtttgaatggtatccttgctgacgaaatgggccttgggaag
accatccaagcaatagcattcttggctcatttagctgaggagaagaatatatggggccct
tttctggtggttgcaccatcatccgtcttgaacaattgggccgatgaaattgatagattc
tgtcctgatctgaaaatacttccttattggggtgggctccaagaaagaatggtgcttaga
aaaaatatcaaccctaagcgactatatcgaagggaggctcgattccacatactaattact
agctaccagttacttgtgactgatgagaagtgcttacggcgtgtgaaatggcaatatatg
gtattagatgaagcccaggcgataaagagttcaaacagcattcgatggaagacattactc
agctttaactgtagaaatcgtttgcttctgactggaacacccatacagaataacatggct
gaactgtgggcccttcttcatttcatcatgccaactttattcgacagccatgagcagttc
aatgaatggttttcaaaaggcatcgagaaccatgcagaacatggaggcactctgaatgag
catcagcttaatagactgcatgcagttctaaagccttttatgttgcgtcgggttaagaaa
gatgtcataacagagttgactgggaagacagaagtcacagttcactgtaaattgagctcc
cgacaactggctttttatcgtgctataaaggacaagatatccatcactgagctgtgcaat
ggtagtcgtggccatctaaatgacaagaaaatagttaatttgatgaacatagttattcaa
ttacgaaaggtctgcaaccacccagagttatttgagcgtaatgagggaagttcctatttt
tactttgcggatatcccaaattctctacttcctcctccattcggggaactggaagacata
cattatgctggagattggaatcctataacatacaaggtgccaaagctggtccatgaagag
atcatccaaaatgctgaaatgccttcttctgtttctggatgtcgcattcagtgcagatct
ttgaagagactttttaatatattttcaccagacaatatttatgagtccacagtgtcacaa
tacagatgctcaaatgattattgcatgagtgatggagcatttgggtttactcgtttgata
gatttatccccggcagaagtttcttttttagctaattgttctgtacttgaaaggttggta
ttttctgtaatgaggtgggatagacagtttattgatgaaactttagacctgttcatggat
ttagaaggtgatgatcttcaatacaatcacctggataaaggaacggttagggctgtcgca
cggatgttgctgctgccaacaaaatctgaggcaagtttactcagaagaaggcttgcaacc
ggtccaggtgatgacccatatgaggcattagtctcctctcatcaggatcggttcatatcc
aatactagacttctgcatgcaacatattttttcattccacaagccagagccccaccaatt
aatgctcagtgccctgacaggagctttgcctaccaaatggttgaggaattgcatcatcct
tggacgaaaaaactgtttgttgggtttgctcgtacgtctgagtttaatggtcccagaaga
cctattgatcctcatcatttgatccaggagatgccctcagaatcgtatgttccgcccttg
cttgagctcccatacagcatatttggttcctctccaccaatgcgaagctttgatcctgca
aaaatgcttacggattctgggaagcttcagacactggatatactattgaaacgtctacga
gctgaaaaccatcgtgtgcttttgtttgcacaaatgacaaaaatgttgaatattctcgag
gactatatgaactacagaaaatacagatatttaagatttgatggatcgtccaatctgatg
gatcgtcgtgacatggttagagacttccagcgtcggaatgacatttttgttttcttgctg
agcactagagctggaggacttggaatcaatctgacagctgctgatactgtaatcttctat
gaaagtgactggaatccaacattagatctacaggcaatggatagggcacatcgactgggt
cagacaagggaggttaccgtatataggctaatatgcaaggagacaattgaggaaaagatt
ttgcaaagagcaagccagaagaatactgttcaacagctggtcatgacaggtggtcatgtg
cggggtgatttgattcctgaggatgttgtttctctacttcttgatgatgcacagttagat
cagaaactgagagaaacatccctgcaggccaaggatcggcagaagaaaaaacgagtaaca
aagggtatacatgtagatgcagaagggaatgtgtctttggaagacttgatgcaggatgca
gaatatgaaccagagaatgcaactaacaaaaagaggaaatcagattctcagaagaaaaat
cctccaaagccacggaatcctcagaaaattgccaagaatacagatctgcctgaggagttg
gacgaacctagcccaattggatatgaggaagatcagatcatgcaacagaggccaaaaaga
ccaaagaggccaacaaagagtgtgaatgagaaccttgaacctgtgttcaactccactgcc
aacatgctgaccacaaactctaccaacgtatcagccgtcatcatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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