KEGG   Ethanoligenens harbinense: Ethha_2286
Entry
Ethha_2286        CDS       T01384                                 
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
eha  Ethanoligenens harbinense
Pathway
eha03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ethha_2286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eha03019]
    Ethha_2286
Messenger RNA biogenesis [BR:eha03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Ethha_2286
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B_2 Lactamase_B
Other DBs
NCBI-ProteinID: ADU27799
UniProt: E6U4R4
Position
complement(2452486..2454276)
AA seq 596 aa
MTTNNPATPATPERPGQPSAAAAKASAPRRQNPRPYHRGRRKPTVKPGLPLRIVSLGGLN
EIGKNITAYECGDDIVIVDCGLAFPDSDMLGVDLVIPDVTWLVKNKDRIRGVVLTHGHED
HIGALPYVLKQVNMPLYGTELTLALVEGKLKEHGLTGKVKLHVVKPGDTVKLGCMTVEFI
NVNHSIAGSVALAINTPGGLFVQTGDFKIDCTPIHGEMIDLARFGELGKEGVTGLLMDST
NAERPGYTLSERKVGEALNTLFAKAEGKRLIIATFASNVHRVQQIVDYAQKYGRHVAVSG
RSMVNVCGIAAELGYLRVPEGLVVDIDEIDRFPKEKMVIVTTGSQGEAMSALYRMAYSDH
RKVVVGPDDFVIISANPIPGNEKTVDRVVNELMRLGAEVVYEEVHVSGHARQEELKIIMS
LCKPTYFIPVHGEYKHLMKNASLARSIGIPDKNIIITDIGKVMEFDKGNFKFVGTVPAGR
VLVDGTGVGDVGSIVLRDRKHLAQDGLIVVVATIDGASGALVAGPDIVSRGFVYVRESES
LMEQTRLTARDVLMDCADAHVTEWGTIKSRVKDALSKLLYERTKRSPMILPVIMEV
NT seq 1791 nt   +upstreamnt  +downstreamnt
gtgactacaaacaatccggcaacgccggcaaccccggagcgcccgggtcaaccatccgcc
gcggcggcgaaggcatccgccccgcggcgccagaacccccgtccctaccatcgcggccgg
cgcaaacccacggtcaagccggggcttccgctgcgcatcgtttcgctgggcgggctcaat
gagatcggtaagaacatcaccgcctacgagtgcggagacgatatcgttatcgtggactgc
ggccttgcgtttccagacagcgacatgctcggcgtcgatctggtcatccccgatgtgacc
tggctggtcaaaaataaggaccgtatccgcggcgtggtgcttacacacgggcacgaggac
catatcggcgcgctgccgtatgtgctcaagcaggtgaacatgccgctttacggcaccgaa
ctcactcttgcgctggtggagggcaagctgaaggaacacggccttacgggcaaagtgaag
ctgcatgtcgtcaagccgggcgacacggtcaagctcggctgcatgacggtcgagttcatc
aacgtcaaccattccatcgccggttcggtggcgctggccatcaacacgccgggcggcctg
tttgtgcagacgggcgacttcaagatcgactgcacgcccatccacggcgagatgatcgac
ttggcgcgtttcggcgagttgggcaaggagggtgtgaccggcctgctgatggactccacc
aatgccgagcgtccgggctataccctcagtgagcggaaggtgggcgaagcgctcaatacg
ctttttgccaaggcggagggcaagcggcttatcatcgccacctttgcgtccaacgtgcac
cgcgtgcagcagatcgtggactatgcccagaaatacgggcggcatgtcgcggtttcgggc
cggagcatggtcaacgtctgcggcatcgccgcggagctcggttacctgcgcgtgcccgag
ggcctggtggtggacattgacgagatcgaccgtttccccaaggaaaagatggtcatcgtc
accaccggcagccagggcgaggccatgtcggcgctttatcgcatggcctattccgaccac
cgcaaggtggtggtggggccggacgatttcgtcatcatctcggccaaccccattcccggc
aacgagaagacggtggaccgcgtggtcaacgagctgatgcggctgggcgccgaagtggtc
tatgaggaagtgcatgtttccggtcacgccaggcaggaagaactcaagatcatcatgtcg
ctctgcaagccaacctatttcatcccggtgcacggcgaatacaagcacttgatgaaaaac
gcgtcgctggcgcgcagcatcggcattccggataaaaacatcatcattaccgacatcggc
aaggtgatggaattcgataaaggcaatttcaaattcgtgggcaccgtgcccgccgggcgg
gtgctggtagacggcaccggcgtcggcgatgtcggctccatcgtgctgcgcgaccgcaag
catcttgcacaggacggcctcatcgtggtggtggccaccattgatggcgcgagcggtgcg
cttgtcgccgggccggatatcgtttcccgcggatttgtgtatgtgcgcgaatcggaatcg
ctgatggagcagacccgcctgaccgcgcgcgacgtgctgatggactgcgccgatgctcat
gtgaccgaatggggcaccatcaagtcccgcgtgaaggacgcgctctccaaactgctgtat
gagcgcaccaagcgcagcccgatgatcctgcccgtgattatggaagtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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