KEGG   Emiliania huxleyi: EMIHUDRAFT_428437
Entry
EMIHUDRAFT_428437 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
ehx  Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ehx03016]
    EMIHUDRAFT_428437
Enzymes [BR:ehx01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     EMIHUDRAFT_428437
Transfer RNA biogenesis [BR:ehx03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    EMIHUDRAFT_428437
SSDB
Motif
Pfam: Flavodoxin_1 Radical_SAM Wyosine_form DUF2064
Other DBs
NCBI-GeneID: 17252749
NCBI-ProteinID: XP_005759029
JGI: Emihu1_428437
UniProt: R1CW77
Position
Unknown
AA seq 712 aa
MSLLRLDLLPAPLLAALSIFALTLVYVIFGAAPSPPEASAAASAADSSAAAAAGRPASGR
QPVVVFYGTLKGGSRRLAERLAAALREAGVAAETVSLIGYDTDGLTSLECAAFVIATYEG
GVPPPGCEAAVDSLASAAADFRGTDLDLRSLRFSVFGCGNSEYPRRDFNAAARRLDGSIR
RLGGVRVARSCWGDDIDNRLSEQFGEWSARAVPSLAAAARPRSGADAAAKRGAARDGSAG
AEQAAGGQDGRAVGLEDENGDEEDEGEGEEDGEEEDADQGGLSDSGGLVDVEDLGARMSK
RAAAAGGEGRKKMVSESLRKSLTKQGYKIVGSHSGVKLCRWTKAMLRGRGGCYKHTFYGI
ASYSCMEATPSLACANKCVFCWRHHDNPVGTSFRWEVDDPHELVEGFEREHLKMVKSLRG
AGRGWAGVDRGGARVGILPERLEDALRRVRHCALSLVGEPIIYPRINAFLAELHRRRIST
FMVTNAQFPKEMEQLVPCTQLYISIDAPTREQLKAVDRPLFSDFWERFNECARVHRQRTV
FRLTLVNGWNDSELDAYAELVRRGAPDLIEVKGVTYCGDSKASPLAHESTAPLLHCPFHH
EVRAYCERLAAAAGPGYTIASEHAHSNCVLIAADAFCRDGVWHTWIDYERFFDLYQDWQA
NGTEFTAAEYAAPTPSWAVYDPLATDGGFDPAERRVAGRGAAKRAASGAAAS
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgagcctgctccgcctcgatttgctgcccgcacccctcctagccgctctctcgatattt
gctctcaccctcgtgtacgtcatctttggggccgctccgtccccgcccgaggccagcgct
gcagcatcagcggccgacagcagcgctgccgccgccgccggccgacccgccagtggcagg
cagccggtggtcgtgttttacggcacgctcaagggcggcagccgccggctcgccgagcgg
ctggccgccgcgctgcgcgaggcgggcgtcgccgccgagacggtgagcctcatcgggtac
gacacggacggcctcacgtcgctggagtgcgccgcgtttgtcatcgccacgtacgagggc
ggcgtgccgcccccggggtgcgaagcggcggtggactcgctcgccagcgccgccgcagac
tttcgcggcactgatctcgacctgcgctcgctgcgattcagcgtgtttgggtgcggcaac
tccgagtacccgcgccgcgacttcaacgcggcggcgcggcggctggacgggtcgatccgg
cggctcgggggggtgcgggtcgcccgctcctgctggggcgacgacatcgacaaccggctc
tcggagcagtttggcgagtggagcgcgcgcgcggtcccgagcttggcggcggcggcgagg
ccgcgaagcggcgcagacgctgcggcaaagcggggggcggcgcgggatgggagcgcgggg
gcggagcaggcggcgggcgggcaggatggccgcgccgtcggcctggaggacgagaacggg
gacgaggaggacgagggggagggggaggaggacggggaggaggaggatgcagatcagggc
gggctgtcggacagcggcggcctggtggacgtcgaggacctgggcgcgcggatgagcaag
cgcgcggcggcggccggcggcgagggtcgcaagaagatggtgagtgagtctttgcgcaag
tcgctcacgaagcaggggtacaagatcgtcggctcgcactcgggggtcaagctgtgccgg
tggacaaaggcgatgctgcgcgggcggggcggctgctacaagcacaccttctacggcatc
gcctcgtactcgtgcatggaggcgacaccgtccctcgcgtgcgcaaacaagtgcgtcttt
tgctggcggcaccacgacaacccggtcggcacctccttccgctgggaggtcgacgacccg
cacgagctcgtcgagggcttcgagcgtgagcacctcaagatggtcaagtcgctgcgcggc
gctggccgaggctgggccggggtggaccgaggtggagcgcgggtaggcatcctgcccgag
cggctcgaggacgccctccggcgcgtccgccactgcgccctctcgctggtcggcgagccg
atcatctacccgcgcatcaacgcgtttctcgcggagctgcaccggcgccgcatctccacc
ttcatggtgaccaacgcgcagttccccaaggagatggagcagctcgttccgtgcacgcag
ctctacatctccatcgacgcgcccacgcgcgagcagctcaaggcggtggaccggccgctc
ttctccgacttttgggagcggttcaacgagtgcgcgcgagtgcataggcagcgcacggtc
ttccggctgacgctcgtcaacggctggaacgactccgagctcgatgcgtacgcggagctg
gtgcggcgcggcgcgccggacctgatcgaggtcaagggcgtcacctactgcggcgactcg
aaggcctcgcccctcgcgcacgagtcgaccgcgcctcttctccactgccccttccaccac
gaggtgcgcgcctactgcgagcggctcgccgccgccgccggccccggctacaccatcgcg
tccgagcacgcccactccaactgcgtcctgatcgccgccgacgcgttttgccgcgacggc
gtttggcacacgtggatcgactacgagcgcttcttcgacctgtaccaagactggcaggcc
aacggcaccgagttcaccgccgccgagtacgcggccccgacgccgtcgtgggccgtctac
gacccgctcgccaccgacggcgggttcgaccccgccgagaggcgggtcgcgggcaggggg
gccgcgaagcgggcggcgagcggcgccgccgcgagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (88)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (105)   

Download RDF
DBGET integrated database retrieval system