KEGG   Emiliania huxleyi: EMIHUDRAFT_471129
Entry
EMIHUDRAFT_471129 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K10839  UV excision repair protein RAD23
Organism
ehx  Emiliania huxleyi
Pathway
ehx03420  Nucleotide excision repair
ehx04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EMIHUDRAFT_471129
  09124 Replication and repair
   03420 Nucleotide excision repair
    EMIHUDRAFT_471129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ehx03051]
    EMIHUDRAFT_471129
   03400 DNA repair and recombination proteins [BR:ehx03400]
    EMIHUDRAFT_471129
Proteasome [BR:ehx03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    EMIHUDRAFT_471129
DNA repair and recombination proteins [BR:ehx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      EMIHUDRAFT_471129
SSDB
Motif
Pfam: ubiquitin UBA XPC-binding Rad60-SLD UBA_3 DUF1421
Other DBs
NCBI-GeneID: 17253772
NCBI-ProteinID: XP_005760053
JGI: Emihu1_471129
UniProt: R1DFU3
Position
Unknown
AA seq 375 aa
MLIKTLADEKYEVDVAETATVAEVKAKLQAMDIGAPADRSKIIFRGRVLADSAELSSLGI
APGDFMVLMKPKPAPAASAAAPVAAPTPPPAPAPAPEPEPAPAPPPAAPPGVDAAVVDSL
VEMGFPRDAVVVALTAAFGNADRAAQYLFDPSSMPAESAPPAAPPPEATPLAAPPAAAPP
TAAPAAPAATPAFTADNILAAIGGAAPAAPPPLTPLQRMLSEPRLMQCVTLARQDPSQLG
PLLQQLSTEAPALLTLVQAHQGSGHAQGTKRGGGAPLLAKRPARKPNARAETSRRVGDRR
TCSLTRTEVRRRQQRRFCGALSVVQHPAAAAAPNAAAAPTVHATEASRPRSLFLQGGAGC
GGGVWLGRTHRLRFF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgctcatcaagacgctcgccgacgagaaatacgaggtcgatgtggccgagacggcgacg
gtcgccgaggtcaaggccaaactccaggccatggatatcggggcgcccgcagaccgctcc
aaaatcatctttcgtggccgcgtgctcgcagacagcgccgaactctcctcgctcggcatc
gccccaggcgactttatggtgctcatgaagcccaagcctgcgcctgccgcatccgccgcg
gcgccggtcgctgcgccgacgccacctccagcgccggcgccggcaccggaaccggagccc
gctccggcgccaccgcccgcagcgccgcctggagtcgacgctgctgtggtggactcactc
gttgagatgggattcccgcgcgatgccgtcgtggtcgctctgaccgcagccttcgggaat
gccgatcgcgcggctcagtacctcttcgacccctcctcgatgccggcagagagcgctccg
cccgctgcgccacctccggaggcgactccgctggccgcgccgccggcggccgcgccgccg
actgccgcgcccgcggccccggcggccactcccgccttcaccgcggacaacatcctagct
gcgatcggcggagcggcgcccgccgcgccgcctccgctgacgccgctgcagcgcatgctg
tcggagccacgactaatgcagtgtgtgacgctggcgcggcaggacccgagccagctgggc
ccgctgctgcagcagctgagcaccgaggcacccgccctcctcaccctcgtgcaggcccac
cagggttccgggcatgcacaaggaacaaagcgcggggggggtgccccgcttctggctaag
cggcccgcgcgaaaacctaacgcccgcgccgaaacctcgcgccgggtgggggataggcga
acctgctctttgactcggactgaggtgcggcggcggcagcagcggcggttctgcggggcg
ttgtcggtggtgcagcaccccgccgcggcggcggcccccaacgcggcggcggccccaacg
gtgcacgcgacagaggcatctcgtccgaggtcgctgtttttgcaggggggtgcggggtgt
ggagggggagtgtggttggggcggactcacaggctgcgattcttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (69)   

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