KEGG   Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_1921
Entry
ECOK1_1921        CDS       T01997                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
eih  Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Brite
KEGG Orthology (KO) [BR:eih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:eih03016]
    ECOK1_1921 (rnd)
Enzymes [BR:eih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     ECOK1_1921 (rnd)
Transfer RNA biogenesis [BR:eih03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ECOK1_1921 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ADE88711
Position
complement(1949797..1950924)
AA seq 375 aa
MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGI
TDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAAL
DECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEEALPQPMLNLMDM
PGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGE
LMAEALHNLLQEYPQ
NT seq 1128 nt   +upstreamnt  +downstreamnt
ttgaattaccaaatgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgt
gcctttccggcgatagccctggatactgaatttgttcgtacgcgcacttattacccgcag
ctgggtttaattcaactttttgatggtgagcatctggcgctaattgatcctctcgggatc
accgactggtcaccgctgaaagcgatcctgcgcgatccgtccatcacaaaatttcttcat
gcaggcagtgaagatctggaagtgttcctcaatgtctttggcgaattaccacaacccttg
attgacacgcaaatccttgctgccttctgcggacgcccgatgtcatggggtttcgcttcc
atggtggaagagtattccggcgttacgctggacaagagtgaatcgcgcaccgactggctg
gccagaccgctgaccgaacgtcagtgtgaatacgcagcggcggatgtctggtatctgtta
ccgatcaccgcaaagcttatggtagaaacggaggcctccggctggctacctgcggcgctg
gatgaatgccgcctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagacgcctgg
cgtgatatcaccaatgcctggcaattacgcacacgccaactggcctgtctgcaactgtta
gccgactggcgattgcgcaaggcgcgagagcgcgatctggcggtgaactttgtcgtgcgt
gaagagcatttgtggtcggtagcgcgttatatgccgggaagtctgggcgaactggacagc
ctgggcttatccggtagcgaaatccgcttccacggtaaaacgttgctggcgctggtggaa
aaagcgcaggcattgccggaagaggccttaccgcagccgatgcttaacctgatggacatg
ccgggttatcgtaaagcgtttaaagcgattaagtcgctgattactgacgtcagcgaaacg
cacaagatcagcgccgaattgctggcatcgcgtcggcaaatcaaccaactgctgaactgg
cactggaaactgaaaccgcagaacaatttgccggagctgatttccggctggcgtggtgag
ctgatggcggaagcattacacaatttattgcaggaatatccacagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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