KEGG   Entamoeba invadens: EIN_359900
Entry
EIN_359900        CDS       T04133                                 
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
eiv  Entamoeba invadens
Pathway
eiv03013  Nucleocytoplasmic transport
eiv03015  mRNA surveillance pathway
eiv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eiv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EIN_359900
  09122 Translation
   03013 Nucleocytoplasmic transport
    EIN_359900
   03015 mRNA surveillance pathway
    EIN_359900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eiv03019]
    EIN_359900
   03041 Spliceosome [BR:eiv03041]
    EIN_359900
   03009 Ribosome biogenesis [BR:eiv03009]
    EIN_359900
   03012 Translation factors [BR:eiv03012]
    EIN_359900
Enzymes [BR:eiv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EIN_359900
Messenger RNA biogenesis [BR:eiv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     EIN_359900
   mRNA cycle factors
    Stress granule specific factors
     EIN_359900
Spliceosome [BR:eiv03041]
 Complex C
  Other components
   EJC/TREX
    EIN_359900
Ribosome biogenesis [BR:eiv03009]
 Eukaryotic type
  90S particles
   Helicases
    EIN_359900
Translation factors [BR:eiv03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    EIN_359900
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_19 CMS1 AAA_30 Helicase_RecD
Other DBs
NCBI-GeneID: 14889828
NCBI-ProteinID: XP_004257668
UniProt: A0A0A1U7R4
Position
Unknown
AA seq 384 aa
MSDKSDNVPVYDAFEKMHLKEEILKGIYKQGYSKPSPIQQRAIVPISEGRDVIAQSQSGT
GKTATFSTGVLQLVEPQKREVQVIIVSPTRELATQSENVIEGLSQYLTISVRACVGGKSE
KEDVKAIERGCQVVSGTPGRLLTLIKKRVLAVKFVKVIVLDEADQMLDKGFTRAIYDIFK
YLPERRQIVLCSATLTPEVLEIASLLMKNPLRILTKREKVTLDIIKQYYVKLAREDQKFD
TLCEIYDTMTITQSVIFCNMRKKVDWLTENMLKANFPVISMHAEMPQEEREYVMNVFRKG
EKRVLITTDIWARGIDVTQISLVVNYDFPNNREVYVHRIGRSGRFGRNGVAINFVLDSEM
NELKDLMDYYSTKINVLPENFADL
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgtctgacaaaagtgacaacgttcctgtgtacgatgcctttgaaaagatgcatttgaaa
gaggagattttgaagggcatttataaacaaggttatagtaaaccctcccctatacaacag
cgtgcgatcgttccaataagtgaaggtcgtgatgtgattgcccaatcgcagtcggggact
ggtaagactgctacgttttcaactggagtattacagttagttgagccacagaaacgggag
gtacaagtaataatagtctccccaacacgtgaattagcaacgcagtctgaaaacgtcatt
gaaggtctttctcagtacttaacaatttccgttcgcgcttgtgtcggtggtaaatcggaa
aaggaagacgtcaaagccattgaacgtgggtgtcaagtcgtatctggtacccccggtcgt
ttactcacgttgatcaaaaagagggttttagccgttaaatttgtcaaagtgatagtctta
gacgaggccgatcaaatgcttgacaaaggcttcactcgtgccatttacgacatcttcaaa
tatcttccggagcgccggcagatcgttttgtgttcggccacattaactcctgaagtcctt
gaaatcgcgagtttattaatgaagaatccactccggattttgaccaaacgagagaaagtg
actcttgacatcatcaaacagtattacgtcaaattagctcgcgaagatcaaaagttcgat
actttatgtgaaatttatgacactatgactatcactcaatcagtcattttctgtaacatg
cgaaagaaagtcgactggctaacggagaatatgctcaaggcaaatttccctgtcatctca
atgcatgctgagatgcctcaagaggagcgagaatatgtgatgaatgtctttcgaaaaggc
gagaagcgcgtgttaatcactacagatatctgggcaagaggaatcgatgtcacacaaatc
agtttagtcgtgaattatgacttccccaacaacagggaagtctatgtccacagaatcggg
cggagtggccgtttcggcagaaatggcgttgcaattaatttcgtgttagacagtgagatg
aatgaactaaaagacttaatggactattattcaacaaagatcaatgtgcttcctgaaaac
tttgctgatttgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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