KEGG   Entamoeba invadens: EIN_491850
Entry
EIN_491850        CDS       T04133                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit D, putative
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
eiv  Entamoeba invadens
Pathway
eiv03020  RNA polymerase
eiv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eiv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EIN_491850
  09124 Replication and repair
   03420 Nucleotide excision repair
    EIN_491850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eiv03021]
    EIN_491850
   03400 DNA repair and recombination proteins [BR:eiv03400]
    EIN_491850
Transcription machinery [BR:eiv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     EIN_491850
DNA repair and recombination proteins [BR:eiv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EIN_491850
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac Fer4_7 Fer4_9
Other DBs
NCBI-GeneID: 14887954
NCBI-ProteinID: XP_004255747
UniProt: A0A0A1U7F8
Position
Unknown
AA seq 280 aa
MEVEDKVQITGIETHGEKLSFRIYNTDTSFVNGLRRMIMAEVPTIAIQLVRVHLNTSYLC
DEYIAHRLGLIPLDSTKVYDFEDGDQTIFNIRVVNENERESLNVTSNDLQFVEGKKLFPV
GYKSDNPIIITQLGPRQSLYVDCFATKGTGKFHAKWNPTCQCVFQTLADIQINETKLANL
TGEQRRTFCEMCPQKVFEFQEINGRITVDHPESCIFCQECTVYSKDIGQRNFCTVTPKTD
EFIFKVEGTGVYPAKSVVSYGFGEMINKFSYLKSELGKFK
NT seq 843 nt   +upstreamnt  +downstreamnt
atggaagtagaggacaaagtacaaatcacaggcattgagacccatggcgagaaattgtca
tttagaatttacaacacagacacttcttttgtgaatggtcttcgtcgaatgataatggct
gaagtacctaccattgccattcaacttgttcgtgtccacttaaacacatcatatctctgt
gatgagtacatcgctcatagacttggcctcattccgctcgactcgactaaggtctacgat
ttcgaggatggcgaccaaacgattttcaatatccgagtggtcaacgagaatgagagagag
tcgctgaatgtcacatcgaacgacctccagtttgtcgaagggaagaaattgtttcctgtt
ggatacaaatcggataacccaattattatcacacaacttggcccacgtcagtcgttgtat
gttgactgcttcgcgacaaaggggacggggaaattccacgcgaagtggaacccgacgtgt
cagtgtgtatttcagacgcttgccgacatccaaatcaacgaaactaaactcgcgaattta
acaggggaacagagaagaacgttttgcgagatgtgcccacaaaaggtctttgagttccaa
gagatcaatgggaggataactgtcgatcatcctgagagttgtatattttgtcaagagtgt
acagtctattcgaaggatattggacaaagaaacttttgtacagtaactccgaaaacagat
gaatttatttttaaagtagaaggcactggggtgtatcctgcaaagtctgtcgtatcttat
gggtttggggagatgattaacaaattcagttacttaaagagtgaacttgggaagttcaag
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system